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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL12A_YEAST (P0CX53)

Summary

This is the summary of UniProt entry RL12A_YEAST (P0CX53) (via secondary accession P17079).

Description: 60S ribosomal protein L12-A
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 165 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L11_N 12 70
low_complexity n/a 69 79
Pfam A Ribosomal_L11 73 143
disorder n/a 84 100
low_complexity n/a 151 165
disorder n/a 156 157

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P0CX53. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPPKFDPNEV KYLYLRAVGG EVGASAALAP KIGPLGLSPK KVGEDIAKAT
50
51
KEFKGIKVTV QLKIQNRQAA ASVVPSASSL VITALKEPPR DRKKDKNVKH
100
101
SGNIQLDEII EIARQMRDKS FGRTLASVTK EILGTAQSVG CRVDFKNPHD
150
151
IIEGINAGEI EIPEN                                      
165
 

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Checksums:
CRC64:0B23A483781DFBE5
MD5:0c90a07dcc84e2531ce713a2b705cbee

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L11 73 - 138 3IZS J 73 - 138 Jmol AstexViewer SPICE
73 - 143 1S1I K 73 - 143 Jmol AstexViewer SPICE
3J16 H 73 - 143 Jmol AstexViewer SPICE
3O5H L 73 - 143 Jmol AstexViewer SPICE
Ribosomal_L11_N 12 - 70 3IZS J 12 - 70 Jmol AstexViewer SPICE
3J16 H 12 - 70 Jmol AstexViewer SPICE
3O5H L 12 - 70 Jmol AstexViewer SPICE
13 - 70 1S1I K 13 - 70 Jmol AstexViewer SPICE