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11  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RET4_BOVIN (P18902)

Summary

This is the summary of UniProt entry RET4_BOVIN (P18902).

Description: Retinol-binding protein 4
Source organism: Bos taurus (Bovine) (NCBI taxonomy ID 9913)
View Pfam proteome data.
Length: 183 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Lipocalin 21 170

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P18902. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
ERDCRVSSFR VKENFDKARF AGTWYAMAKK DPEGLFLQDN IVAEFSVDEN
50
51
GHMSATAKGR VRLLNNWDVC ADMVGTFTDT EDPAKFKMKY WGVASFLQKG
100
101
NDDHWIIDTD YETFAVQYSC RLLNLDGTCA DSYSFVFARD PSGFSPEVQK
150
151
IVRQRQEELC LARQYRLIPH NGYCDGKSER NIL                  
183
 

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Checksums:
CRC64:D6BA064CB9E67C09
MD5:944fa23ca24098ba13ed8472b6969e3a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Lipocalin 21 - 170 1ERB A 21 - 170 Jmol AstexViewer SPICE
1FEL A 21 - 170 Jmol AstexViewer SPICE
1FEM A 21 - 170 Jmol AstexViewer SPICE
1FEN A 21 - 170 Jmol AstexViewer SPICE
1HBP A 21 - 170 Jmol AstexViewer SPICE
1HBQ A 21 - 170 Jmol AstexViewer SPICE
1KT3 A 21 - 170 Jmol AstexViewer SPICE
1KT4 A 21 - 170 Jmol AstexViewer SPICE
1KT5 A 21 - 170 Jmol AstexViewer SPICE
1KT6 A 21 - 170 Jmol AstexViewer SPICE
1KT7 A 21 - 170 Jmol AstexViewer SPICE