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65  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL3_HALMA (P20279)

Summary

This is the summary of UniProt entry RL3_HALMA (P20279).

Description: 50S ribosomal protein L3P
Source organism: Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) (NCBI taxonomy ID 272569)
View Pfam proteome data.
Length: 338 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 90
Pfam A Ribosomal_L3 46 313
disorder n/a 93 171
disorder n/a 173 183
disorder n/a 187 188
disorder n/a 193 196
disorder n/a 202 225
disorder n/a 227 274
disorder n/a 281 286
disorder n/a 294 304
disorder n/a 306 338

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P20279. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPQPSRPRKG SLGFGPRKRS TSETPRFNSW PSDDGQPGVQ GFAGYKAGMT
50
51
HVVLVNDEPN SPREGMEETV PVTVIETPPM RAVALRAYED TPYGQRPLTE
100
101
VWTDEFHSEL DRTLDVPEDH DPDAAEEQIR DAHEAGDLGD LRLITHTVPD
150
151
AVPSVPKKKP DVMETRVGGG SVSDRLDHAL DIVEDGGEHA MNDIFRAGEY
200
201
ADVAGVTKGK GTQGPVKRWG VQKRKGKHAR QGWRRRIGNL GPWNPSRVRS
250
251
TVPQQGQTGY HQRTELNKRL IDIGEGDEPT VDGGFVNYGE VDGPYTLVKG
300
301
SVPGPDKRLV RFRPAVRPND QPRLDPEVRY VSNESNQG             
338
 

Show the unformatted sequence.

Checksums:
CRC64:996D3BE503F4DBD4
MD5:0c5d508d96e0570372cdff0b2d93a31e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L3 46 - 313 1JJ2 B 45 - 312 Jmol AstexViewer SPICE
1K73 D 45 - 312 Jmol AstexViewer SPICE
1K8A D 45 - 312 Jmol AstexViewer SPICE
1K9M D 45 - 312 Jmol AstexViewer SPICE
1KC8 D 45 - 312 Jmol AstexViewer SPICE
1KD1 D 45 - 312 Jmol AstexViewer SPICE
1KQS B 45 - 312 Jmol AstexViewer SPICE
1M1K D 45 - 312 Jmol AstexViewer SPICE
1M90 D 45 - 312 Jmol AstexViewer SPICE
1N8R D 45 - 312 Jmol AstexViewer SPICE
1NJI D 45 - 312 Jmol AstexViewer SPICE
1Q7Y D 45 - 312 Jmol AstexViewer SPICE
1Q81 D 45 - 312 Jmol AstexViewer SPICE
1Q82 D 45 - 312 Jmol AstexViewer SPICE
1Q86 D 45 - 312 Jmol AstexViewer SPICE
1QVF B 45 - 312 Jmol AstexViewer SPICE
1QVG B 45 - 312 Jmol AstexViewer SPICE
1S72 B 45 - 312 Jmol AstexViewer SPICE
1VQ4 B 45 - 312 Jmol AstexViewer SPICE
1VQ5 B 45 - 312 Jmol AstexViewer SPICE
1VQ6 B 45 - 312 Jmol AstexViewer SPICE
1VQ7 B 45 - 312 Jmol AstexViewer SPICE
1VQ8 B 45 - 312 Jmol AstexViewer SPICE
1VQ9 B 45 - 312 Jmol AstexViewer SPICE
1VQK B 45 - 312 Jmol AstexViewer SPICE
1VQL B 45 - 312 Jmol AstexViewer SPICE
1VQM B 45 - 312 Jmol AstexViewer SPICE
1VQN B 45 - 312 Jmol AstexViewer SPICE
1VQO B 45 - 312 Jmol AstexViewer SPICE
1VQP B 45 - 312 Jmol AstexViewer SPICE
1W2B B 45 - 312 Jmol AstexViewer SPICE
1YHQ B 45 - 312 Jmol AstexViewer SPICE
1YI2 B 45 - 312 Jmol AstexViewer SPICE
1YIJ B 45 - 312 Jmol AstexViewer SPICE
1YIT B 45 - 312 Jmol AstexViewer SPICE
1YJ9 B 45 - 312 Jmol AstexViewer SPICE
1YJN B 45 - 312 Jmol AstexViewer SPICE
1YJW B 45 - 312 Jmol AstexViewer SPICE
2OTJ B 45 - 312 Jmol AstexViewer SPICE
2OTL B 45 - 312 Jmol AstexViewer SPICE
2QA4 B 45 - 312 Jmol AstexViewer SPICE
2QEX B 45 - 312 Jmol AstexViewer SPICE
3CC2 B 45 - 312 Jmol AstexViewer SPICE
3CC4 B 45 - 312 Jmol AstexViewer SPICE
3CC7 B 45 - 312 Jmol AstexViewer SPICE
3CCE B 45 - 312 Jmol AstexViewer SPICE
3CCJ B 45 - 312 Jmol AstexViewer SPICE
3CCL B 45 - 312 Jmol AstexViewer SPICE
3CCM B 45 - 312 Jmol AstexViewer SPICE
3CCQ B 45 - 312 Jmol AstexViewer SPICE
3CCR B 45 - 312 Jmol AstexViewer SPICE
3CCS B 45 - 312 Jmol AstexViewer SPICE
3CCU B 45 - 312 Jmol AstexViewer SPICE
3CCV B 45 - 312 Jmol AstexViewer SPICE
3CD6 B 45 - 312 Jmol AstexViewer SPICE
3CMA B 45 - 312 Jmol AstexViewer SPICE
3CME B 45 - 312 Jmol AstexViewer SPICE
3CPW B 45 - 312 Jmol AstexViewer SPICE
3CXC B 45 - 312 Jmol AstexViewer SPICE
3G4S B 45 - 312 Jmol AstexViewer SPICE
3G6E B 45 - 312 Jmol AstexViewer SPICE
3G71 B 45 - 312 Jmol AstexViewer SPICE
3I55 B 45 - 312 Jmol AstexViewer SPICE
3I56 B 45 - 312 Jmol AstexViewer SPICE
3OW2 B 45 - 312 Jmol AstexViewer SPICE