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38  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PSB1_YEAST (P23724)

Summary

This is the summary of UniProt entry PSB1_YEAST (P23724).

Description: Proteasome component C5 EC=3.4.25.1
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 241 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 15 20
Pfam A Proteasome 26 226

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P23724. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MATIASEYSS EASNTPIEHQ FNPYGDNGGT ILGIAGEDFA VLAGDTRNIT
50
51
DYSINSRYEP KVFDCGDNIV MSANGFAADG DALVKRFKNS VKWYHFDHND
100
101
KKLSINSAAR NIQHLLYGKR FFPYYVHTII AGLDEDGKGA VYSFDPVGSY
150
151
EREQCRAGGA AASLIMPFLD NQVNFKNQYE PGTNGKVKKP LKYLSVEEVI
200
201
KLVRDSFTSA TERHIQVGDG LEILIVTKDG VRKEFYELKR D         
241
 

Show the unformatted sequence.

Checksums:
CRC64:770A4DF1DF0A0F0E
MD5:fc9352266efbcaef1b03c89b8e185350

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Proteasome 26 - 226 1FNT a 3 - 198 Jmol AstexViewer SPICE
M 3 - 198 Jmol AstexViewer SPICE
1G0U L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
1G65 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
1JD2 L 3 - 178 Jmol AstexViewer SPICE
S 3 - 178 Jmol AstexViewer SPICE
1RYP 1 3 - 198 Jmol AstexViewer SPICE
M 3 - 198 Jmol AstexViewer SPICE
1VSY 1 607 - 6198 Jmol AstexViewer SPICE
M 607 - 6198 Jmol AstexViewer SPICE
1Z7Q a 7 - 207 Jmol AstexViewer SPICE
M 7 - 207 Jmol AstexViewer SPICE
2F16 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
2FAK L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
2GPL L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
2ZCY L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3BDM L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3D29 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3DY3 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3DY4 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3E47 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3GPJ L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3GPT L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3GPW L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3HYE L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3L5Q 3 607 - 6198 Jmol AstexViewer SPICE
Q 607 - 6198 Jmol AstexViewer SPICE
3MG0 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3MG4 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3MG6 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3MG7 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3MG8 L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3NZJ L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3NZW L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3NZX L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3OEU L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3OEV L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3OKJ L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3SDI L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3SDK L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3SHJ L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3TDD L 3 - 178 Jmol AstexViewer SPICE
Z 3 - 178 Jmol AstexViewer SPICE
3UN4 L 7 - 207 Jmol AstexViewer SPICE
Z 7 - 207 Jmol AstexViewer SPICE
3UN8 L 7 - 207 Jmol AstexViewer SPICE
Z 7 - 207 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.