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42  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: XYLA_STRRU (P24300)

Summary

This is the summary of UniProt entry XYLA_STRRU (P24300).

Description: Xylose isomerase EC=5.3.1.5
Source organism: Streptomyces rubiginosus (NCBI taxonomy ID 1929)
Length: 388 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A AP_endonuc_2 40 265
disorder n/a 59 60
disorder n/a 72 74
disorder n/a 148 150
low_complexity n/a 356 367

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P24300. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNYQPTPEDR FTFGLWTVGW QGRDPFGDAT RRALDPVESV RRLAELGAHG
50
51
VTFHDDDLIP FGSSDSEREE HVKRFRQALD DTGMKVPMAT TNLFTHPVFK
100
101
DGGFTANDRD VRRYALRKTI RNIDLAVELG AETYVAWGGR EGAESGGAKD
150
151
VRDALDRMKE AFDLLGEYVT SQGYDIRFAI EPKPNEPRGD ILLPTVGHAL
200
201
AFIERLERPE LYGVNPEVGH EQMAGLNFPH GIAQALWAGK LFHIDLNGQN
250
251
GIKYDQDLRF GAGDLRAAFW LVDLLESAGY SGPRHFDFKP PRTEDFDGVW
300
301
ASAAGCMRNY LILKERAAAF RADPEVQEAL RASRLDELAR PTAADGLQAL
350
351
LDDRSAFEEF DVDAAAARGM AFERLDQLAM DHLLGARG             
388
 

Show the unformatted sequence.

Checksums:
CRC64:4C675184B62C97FB
MD5:14e8e1edf41244cb53f963cb5e72daea

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
AP_endonuc_2 40 - 265 1GW9 A 40 - 265 Jmol AstexViewer SPICE
1MNZ A 40 - 265 Jmol AstexViewer SPICE
1O1H A 39 - 264 Jmol AstexViewer SPICE
B 39 - 264 Jmol AstexViewer SPICE
1OAD A 40 - 265 Jmol AstexViewer SPICE
B 40 - 265 Jmol AstexViewer SPICE
1XIB A 40 - 265 Jmol AstexViewer SPICE
1XIC A 40 - 265 Jmol AstexViewer SPICE
1XID A 40 - 265 Jmol AstexViewer SPICE
1XIE A 40 - 265 Jmol AstexViewer SPICE
1XIF A 40 - 265 Jmol AstexViewer SPICE
1XIG A 40 - 265 Jmol AstexViewer SPICE
1XIH A 40 - 265 Jmol AstexViewer SPICE
1XII A 40 - 265 Jmol AstexViewer SPICE
1XIJ A 40 - 265 Jmol AstexViewer SPICE
1XIS A 40 - 265 Jmol AstexViewer SPICE
2G4J A 39 - 264 Jmol AstexViewer SPICE
2GLK A 40 - 265 Jmol AstexViewer SPICE
2GUB A 40 - 265 Jmol AstexViewer SPICE
2GVE A 40 - 265 Jmol AstexViewer SPICE
2XIS A 40 - 265 Jmol AstexViewer SPICE
3CWH A 40 - 265 Jmol AstexViewer SPICE
3GNX A 40 - 265 Jmol AstexViewer SPICE
E 40 - 265 Jmol AstexViewer SPICE
3KBJ A 40 - 265 Jmol AstexViewer SPICE
3KBM A 40 - 265 Jmol AstexViewer SPICE
3KBN A 40 - 265 Jmol AstexViewer SPICE
3KBS A 40 - 265 Jmol AstexViewer SPICE
3KBV A 40 - 265 Jmol AstexViewer SPICE
3KBW A 40 - 265 Jmol AstexViewer SPICE
3KCJ A 40 - 265 Jmol AstexViewer SPICE
3KCL A 40 - 265 Jmol AstexViewer SPICE
3KCO A 40 - 265 Jmol AstexViewer SPICE
3N4A A 39 - 264 Jmol AstexViewer SPICE
3QYS A 40 - 265 Jmol AstexViewer SPICE
3QZA A 40 - 265 Jmol AstexViewer SPICE
3U3H A 40 - 265 Jmol AstexViewer SPICE
3XIS A 40 - 265 Jmol AstexViewer SPICE
4A8I A 40 - 265 Jmol AstexViewer SPICE
4A8L A 40 - 265 Jmol AstexViewer SPICE
4A8N A 40 - 265 Jmol AstexViewer SPICE
4A8R A 40 - 265 Jmol AstexViewer SPICE
4XIS A 40 - 265 Jmol AstexViewer SPICE
8XIA A 40 - 265 Jmol AstexViewer SPICE
9XIA A 40 - 265 Jmol AstexViewer SPICE