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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RS2_YEAST (P25443)

Summary

This is the summary of UniProt entry RS2_YEAST (P25443).

Description: 40S ribosomal protein S2
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 254 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 33
low_complexity n/a 11 29
Pfam A Ribosomal_S5 75 141
disorder n/a 83 89
low_complexity n/a 122 132
Pfam A Ribosomal_S5_C 158 231

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P25443. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSAPEAQQQK RGGFGGRNRG RPNRRGPRNT EEKGWVPVTK LGRLVKAGKI
50
51
TTIEEIFLHS LPVKEFQIID TLLPGLQDEV MNIKPVQKQT RAGQRTRFKA
100
101
VVVVGDSNGH VGLGIKTAKE VAGAIRAGII IAKLSVIPIR RGYWGTNLGQ
150
151
PHSLATKTTG KCGSVTVRLI PAPRGSGIVA SPAVKKLLQL AGVEDVYTQS
200
201
NGKTRTLENT LKAAFVAIGN TYGFLTPNLW AEQPLPVSPL DIYSDEASAQ
250
251
KKRF                                                  
254
 

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Checksums:
CRC64:5EFDA4C7DE7BDFFB
MD5:8eb86981ee1e67239d053c7bebab1cdc

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S5 75 - 141 1S1H E 74 - 140 Jmol AstexViewer SPICE
3IZB E 75 - 141 Jmol AstexViewer SPICE
3O2Z B 75 - 141 Jmol AstexViewer SPICE
3O30 B 75 - 141 Jmol AstexViewer SPICE
3U5C C 75 - 141 Jmol AstexViewer SPICE
3U5G C 75 - 141 Jmol AstexViewer SPICE
Ribosomal_S5_C 158 - 223 1S1H E 157 - 222 Jmol AstexViewer SPICE
158 - 231 3IZB E 158 - 231 Jmol AstexViewer SPICE
3O2Z B 158 - 231 Jmol AstexViewer SPICE
3O30 B 158 - 231 Jmol AstexViewer SPICE
3U5C C 158 - 231 Jmol AstexViewer SPICE
3U5G C 158 - 231 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.