Summary
This is the summary of UniProt entry RL5_YEAST (P26321).
| Description: | 60S ribosomal protein L5 |
| Source organism: |
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)
(NCBI taxonomy ID
559292)
View Pfam proteome data. |
| Length: | 297 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam A | Ribosomal_L18p | 26 | 173 |
| low_complexity | n/a | 117 | 136 |
| Pfam A | Ribosomal_L18_c | 192 | 289 |
| disorder | n/a | 258 | 260 |
| disorder | n/a | 264 | 265 |
| disorder | n/a | 271 | 272 |
| low_complexity | n/a | 283 | 294 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession P26321. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MAFQKDAKSS AYSSRFQTPF RRRREGKTDY YQRKRLVTQH KAKYNTPKYR
50 51
LVVRFTNKDI ICQIISSTIT GDVVLAAAYS HELPRYGITH GLTNWAAAYA
100 101
TGLLIARRTL QKLGLDETYK GVEEVEGEYE LTEAVEDGPR PFKVFLDIGL
150 151
QRTTTGARVF GALKGASDGG LYVPHSENRF PGWDFETEEI DPELLRSYIF
200 201
GGHVSQYMEE LADDDEERFS ELFKGYLADD IDADSLEDIY TSAHEAIRAD
250 251
PAFKPTEKKF TKEQYAAESK KYRQTKLSKE ERAARVAAKI AALAGQQ
297
Show the unformatted sequence. |
| Checksums: |
CRC64:14E3B2931C3CAE2B
MD5:07245f7c9cabcde56d61497c973b5026
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Ribosomal_L18_c | 192 - 232 | 1S1I | E | 192 - 232 | Jmol AstexViewer SPICE |
| 192 - 289 | 3IZS | Q | 192 - 289 | Jmol AstexViewer SPICE | |
| 3O58 | E | 192 - 289 | Jmol AstexViewer SPICE | ||
| 3O5H | E | 192 - 289 | Jmol AstexViewer SPICE | ||
| Ribosomal_L18p | 26 - 173 | 1S1I | E | 26 - 173 | Jmol AstexViewer SPICE |
| 3IZS | Q | 26 - 173 | Jmol AstexViewer SPICE | ||
| 3O58 | E | 26 - 173 | Jmol AstexViewer SPICE | ||
| 3O5H | E | 26 - 173 | Jmol AstexViewer SPICE |