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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL5_YEAST (P26321)

Summary

This is the summary of UniProt entry RL5_YEAST (P26321).

Description: 60S ribosomal protein L5
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 297 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L18p 26 173
low_complexity n/a 117 136
Pfam A Ribosomal_L18_c 192 289
disorder n/a 258 260
disorder n/a 264 265
disorder n/a 271 272
low_complexity n/a 283 294

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P26321. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAFQKDAKSS AYSSRFQTPF RRRREGKTDY YQRKRLVTQH KAKYNTPKYR
50
51
LVVRFTNKDI ICQIISSTIT GDVVLAAAYS HELPRYGITH GLTNWAAAYA
100
101
TGLLIARRTL QKLGLDETYK GVEEVEGEYE LTEAVEDGPR PFKVFLDIGL
150
151
QRTTTGARVF GALKGASDGG LYVPHSENRF PGWDFETEEI DPELLRSYIF
200
201
GGHVSQYMEE LADDDEERFS ELFKGYLADD IDADSLEDIY TSAHEAIRAD
250
251
PAFKPTEKKF TKEQYAAESK KYRQTKLSKE ERAARVAAKI AALAGQQ   
297
 

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Checksums:
CRC64:14E3B2931C3CAE2B
MD5:07245f7c9cabcde56d61497c973b5026

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L18_c 192 - 232 1S1I E 192 - 232 Jmol AstexViewer SPICE
192 - 289 3IZS Q 192 - 289 Jmol AstexViewer SPICE
3O58 E 192 - 289 Jmol AstexViewer SPICE
3O5H E 192 - 289 Jmol AstexViewer SPICE
Ribosomal_L18p 26 - 173 1S1I E 26 - 173 Jmol AstexViewer SPICE
3IZS Q 26 - 173 Jmol AstexViewer SPICE
3O58 E 26 - 173 Jmol AstexViewer SPICE
3O5H E 26 - 173 Jmol AstexViewer SPICE