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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: CAC1A_RABIT (P27884)

Summary

This is the summary of UniProt entry CAC1A_RABIT (P27884).

Description: Voltage-dependent P/Q-type calcium channel subunit alpha-1A
Source organism: Oryctolagus cuniculus (Rabbit) (NCBI taxonomy ID 9986)
View Pfam proteome data.
Length: 2424 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
low_complexity n/a 13 46
disorder n/a 31 49
transmembrane n/a 102 119
disorder n/a 126 128
Pfam A Ion_trans 136 359
transmembrane n/a 139 159
transmembrane n/a 171 189
transmembrane n/a 222 245
low_complexity n/a 226 245
disorder n/a 266 279
disorder n/a 283 286
transmembrane n/a 304 325
transmembrane n/a 337 359
coiled_coil n/a 367 387
transmembrane n/a 488 507
transmembrane n/a 519 539
Pfam A Ion_trans 521 713
transmembrane n/a 551 571
transmembrane n/a 577 594
low_complexity n/a 599 610
low_complexity n/a 613 631
transmembrane n/a 614 636
transmembrane n/a 690 714
coiled_coil n/a 710 737
disorder n/a 723 737
low_complexity n/a 727 732
disorder n/a 757 782
disorder n/a 786 792
disorder n/a 799 800
disorder n/a 803 1230
low_complexity n/a 940 956
low_complexity n/a 995 1023
low_complexity n/a 1025 1042
low_complexity n/a 1110 1150
low_complexity n/a 1201 1229
transmembrane n/a 1252 1271
Pfam A Ion_trans 1288 1519
transmembrane n/a 1291 1312
transmembrane n/a 1324 1341
transmembrane n/a 1386 1408
transmembrane n/a 1498 1523
low_complexity n/a 1498 1516
transmembrane n/a 1579 1597
Pfam A Ion_trans 1609 1819
transmembrane n/a 1609 1632
transmembrane n/a 1638 1656
low_complexity n/a 1666 1682
transmembrane n/a 1677 1695
transmembrane n/a 1701 1723
low_complexity n/a 1729 1739
transmembrane n/a 1796 1820
Pfam A Ca_chan_IQ 1957 1991
disorder n/a 1982 2424
Pfam B Pfam-B_9240 2067 2166
low_complexity n/a 2153 2174
Pfam B Pfam-B_7716 2168 2225
low_complexity n/a 2208 2234
low_complexity n/a 2241 2315
low_complexity n/a 2372 2377
low_complexity n/a 2381 2405
low_complexity n/a 2408 2424

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P27884. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARFGDEMPA RYGGGGAGAA AGVVVGAAGG RGAGGSRQGG QPGAQRMYKQ
50
51
SMAQRARTMA LYNPIPVRQN CLTVNRSLFL FSEDNVVRKY AKKITEWPPF
100
101
EYMILATIIA NCIVLALEQH LPDDDKTPMS ERLDDTEPYF IGIFCFEAGI
150
151
KIIALGFAFH KGSYLRNGWN VMDFVVVLTG ILATVGTEFD LRTLRAVRVL
200
201
RPLKLVSGIP SLQVVLKSIM KAMIPLLQIG LLLFFAILIF AIIGLEFYMG
250
251
KFHTTCFEEG TDDIQGESPA PCGTEEPART CPNGTRCQPY WEGPNNGITQ
300
301
FDNILFAVLT VFQCITMEGW TDLLYNSNDA SGNTWNWLYF IPLIIIGSFF
350
351
MLNLVLGVLS GEFAKERERV ENRRAFLKLR RQQQIERELN GYMEWISKAE
400
401
EVILAEDETD VEQRHPFDGA LRRATIKKSK TDLLHPEEAE DQLADIASVG
450
451
SPFARASIKS AKLENSSFFH KKERRMRFYI RRMVKTQAFY WTVLSLVALN
500
501
TLCVAIVHYN QPEWLSDFLY YAEFIFLGLF MSEMFIKMYG LGTRPYFHSS
550
551
FNCFDCGVII GSIFEVIWAV IKPGTSFGIS VLRALRLLRI FKVTKYWASL
600
601
RNLVVSLLNS MKSIISLLFL LFLFIVVFAL LGMQLFGGQF NFDEGTPPTN
650
651
FDTFPAAIMT VFQILTGEDW NEVMYDGIKS QGGVQGGMVF SIYFIVLTLF
700
701
GNYTLLNVFL AIAVDNLANA QELTKDEQEE EEAVNQKLAL QKAKEVAEVS
750
751
PLSAANMSIA MKEQQKNQKP AKSVWEQRTS EMRKQNLLAS REALYSEMDP
800
801
EERWKASYAR HLRPDMKTHL DRPLVVDPQE NRNNNTNKSR VAEPTVDQRL
850
851
GQQRAEDFLR KQARHHDRAR DPSAHAAAGL DARRPWAGSQ EAELSREGPY
900
901
GRESDHQARE GGLEPPGFWE GEAERGKAGD PHRRHAHRQG VGGSGGSRSG
950
951
SPRTGTADGE PRRHRVHRRP GEDGPDDKAE RRGRHREGSR PARSGEGEAE
1000
1001
GPDGGGGGGG ERRRRHRHGP PPAYDPDARR DDRERRHRRR KDTQGSGVPV
1050
1051
SGPNLSTTRP IQQDLSRQEP PLAEDMDNLK NSRLATAEPV SPHENLSHAG
1100
1101
LPQSPAKMGS STDPAGPTPA TAANPQNSTA SRRTPNNPGN PSNPGPPKTP
1150
1151
ENSLIVTNPS TAQTNSAKTA RKPDHTTVEI PPACPPPLNH TVVQVNKNAN
1200
1201
PDPLPKKEDE KKEEVDEGPG EDGPKPMPPY SSMFILSTTN PLRRLCHYIL
1250
1251
NLRYFEMCIL MVIAMSSIAL AAEDPVQPNA PRNNVLRYFD YVFTGVFTFE
1300
1301
MVIKMIDLGL VLHQGAYFRD LWNILDFIVV SGALVAFAFT GNSKGKDINT
1350
1351
IKSLRVLRVL RPLKTIKRLP KLKAVFDCVV NSLKNVFNIL IVYMLFMFIF
1400
1401
AVVAVQLFKG KFFHCTDESK EFEKDCRGKY LLYEKNEVKA RDREWKKYEF
1450
1451
HYDNVLWALL TLFTVSTGEG WPQVLKHSVD ATFENQGPSP GYRMEMSIFY
1500
1501
VVYFVVFPFF FVNIFVALII ITFQEQGDKM MEEYSLEKNE RACIDFAISA
1550
1551
KPLTRHMPQN KQSFQYRMWQ FVVSPPFEYT IMAMIALNTI VLMMKFYGAS
1600
1601
VAYDNALKVF NIVFTSLFSL ECLLKVLAFG ILNYFRDAWN IFDFVTVLGS
1650
1651
ITDILVTEFG NNFINLSFLR LFRAARLIKL LRQGYTIRIL LWTFVQSFKA
1700
1701
LPYVCLLIAM LFFIYAIIGM QVFGNIGIDM EDEDSDEDEF QITEHNNFRT
1750
1751
FFQALMLLFR SATGEAWHNI MLSCLSGKPC DKNSGILTPE CGNEFAYFYF
1800
1801
VSFIFLCSFL MLNLFVAVIM DNFEYLTRDS SILGPHHLDE YVRVWAEYDP
1850
1851
AAWGRMLYRD MYAMLRHMPP PLGLGKNCPA RVAYKRLLRM DLPVADDNTV
1900
1901
HFNSTLMALI RTALDIKIAK GGADKQQMDA ELRKEMMAIW PNLSQKTLDL
1950
1951
LVTPHKSTDL TVGKIYAAMM IMEYYRQSKA KKLQAMREEQ NRTPLMFQRM
2000
2001
EPPPDEGGAG QNALPSTQLD PAGGLMAHED GLKDSPSWVT QRAQEMFQKT
2050
2051
GTWSPERAPP ADMADSQPKP QSVEMREMSQ DGYSDSEHCL PMEGQARAAS
2100
2101
MPRLPAENQR RRGRPRGSDL STICDTSPMK RSASVLGPKA SRRLDDYSLE
2150
2151
RVPPEENQRH HPRRRERAHR TSERSLGRYT DVDTGLGTDL SMTTQSGDLP
2200
2201
SREREQERGR PKDRKHRPHH HHHHHHHPGR GPGRVSPGVS ARRRRRGPVA
2250
2251
RVRPARAPAL AHARARARAP ARLLPELRLR RARRPRPRQR RRPRRRRGGG
2300
2301
GRALRRAPGP REPLAQDSPG RGPSVCLARA ARPAGPQRLL PGPRTGQAPR
2350
2351
ARLPQKPARS VQRERRGLVL SPPPPPPGEL APRAHPARTP RPGPGDSRSR
2400
2401
RGGRRWTASA GKGGGGPRAS APSP                            
2424
 

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Checksums:
CRC64:F7CC4D0AB4B45604
MD5:cc206fdbfdc5edd3348b1fe694705a0e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ca_chan_IQ 1963 - 1982 3DVM B 1963 - 1982 Jmol AstexViewer SPICE