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65  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL13_HALMA (P29198)

Summary

This is the summary of UniProt entry RL13_HALMA (P29198).

Description: 50S ribosomal protein L13P
Source organism: Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) (Halobacterium marismortui) (NCBI taxonomy ID 272569)
View Pfam proteome data.
Length: 145 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L13 9 117

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P29198. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSVAEFDADV IVDARDCIMG RVASQVAEQA LDGETVAVVN AERAVITGRE
50
51
EQIVEKYEKR VDIGNDNGYF YPKRPDGIFK RTIRGMLPHK KQRGREAFES
100
101
VRVYLGNPYD EDGEVLDGTS LDRLSNIKFV TLGEISETLG ANKTW     
145
 

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Checksums:
CRC64:069CE666662AE3BC
MD5:89feb605658352a7da803416bb0286fd

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L13 9 - 117 1JJ2 I 9 - 117 Jmol AstexViewer SPICE
1K73 K 9 - 117 Jmol AstexViewer SPICE
1K8A K 9 - 117 Jmol AstexViewer SPICE
1K9M K 9 - 117 Jmol AstexViewer SPICE
1KC8 K 9 - 117 Jmol AstexViewer SPICE
1KD1 K 9 - 117 Jmol AstexViewer SPICE
1KQS I 9 - 117 Jmol AstexViewer SPICE
1M1K K 9 - 117 Jmol AstexViewer SPICE
1M90 K 9 - 117 Jmol AstexViewer SPICE
1N8R K 9 - 117 Jmol AstexViewer SPICE
1NJI K 9 - 117 Jmol AstexViewer SPICE
1Q7Y K 9 - 117 Jmol AstexViewer SPICE
1Q81 K 9 - 117 Jmol AstexViewer SPICE
1Q82 K 9 - 117 Jmol AstexViewer SPICE
1Q86 K 9 - 117 Jmol AstexViewer SPICE
1QVF I 9 - 117 Jmol AstexViewer SPICE
1QVG I 9 - 117 Jmol AstexViewer SPICE
1S72 J 9 - 117 Jmol AstexViewer SPICE
1VQ4 J 9 - 117 Jmol AstexViewer SPICE
1VQ5 J 9 - 117 Jmol AstexViewer SPICE
1VQ6 J 9 - 117 Jmol AstexViewer SPICE
1VQ7 J 9 - 117 Jmol AstexViewer SPICE
1VQ8 J 9 - 117 Jmol AstexViewer SPICE
1VQ9 J 9 - 117 Jmol AstexViewer SPICE
1VQK J 9 - 117 Jmol AstexViewer SPICE
1VQL J 9 - 117 Jmol AstexViewer SPICE
1VQM J 9 - 117 Jmol AstexViewer SPICE
1VQN J 9 - 117 Jmol AstexViewer SPICE
1VQO J 9 - 117 Jmol AstexViewer SPICE
1VQP J 9 - 117 Jmol AstexViewer SPICE
1W2B I 9 - 117 Jmol AstexViewer SPICE
1YHQ J 9 - 117 Jmol AstexViewer SPICE
1YI2 J 9 - 117 Jmol AstexViewer SPICE
1YIJ J 9 - 117 Jmol AstexViewer SPICE
1YIT J 9 - 117 Jmol AstexViewer SPICE
1YJ9 J 9 - 117 Jmol AstexViewer SPICE
1YJN J 9 - 117 Jmol AstexViewer SPICE
1YJW J 9 - 117 Jmol AstexViewer SPICE
2OTJ J 9 - 117 Jmol AstexViewer SPICE
2OTL J 9 - 117 Jmol AstexViewer SPICE
2QA4 J 9 - 117 Jmol AstexViewer SPICE
2QEX J 9 - 117 Jmol AstexViewer SPICE
3CC2 J 9 - 117 Jmol AstexViewer SPICE
3CC4 J 9 - 117 Jmol AstexViewer SPICE
3CC7 J 9 - 117 Jmol AstexViewer SPICE
3CCE J 9 - 117 Jmol AstexViewer SPICE
3CCJ J 9 - 117 Jmol AstexViewer SPICE
3CCL J 9 - 117 Jmol AstexViewer SPICE
3CCM J 9 - 117 Jmol AstexViewer SPICE
3CCQ J 9 - 117 Jmol AstexViewer SPICE
3CCR J 9 - 117 Jmol AstexViewer SPICE
3CCS J 9 - 117 Jmol AstexViewer SPICE
3CCU J 9 - 117 Jmol AstexViewer SPICE
3CCV J 9 - 117 Jmol AstexViewer SPICE
3CD6 J 9 - 117 Jmol AstexViewer SPICE
3CMA J 9 - 117 Jmol AstexViewer SPICE
3CME J 9 - 117 Jmol AstexViewer SPICE
3CPW I 9 - 117 Jmol AstexViewer SPICE
3CXC I 9 - 117 Jmol AstexViewer SPICE
3G4S J 9 - 117 Jmol AstexViewer SPICE
3G6E J 9 - 117 Jmol AstexViewer SPICE
3G71 J 9 - 117 Jmol AstexViewer SPICE
3I55 J 9 - 117 Jmol AstexViewer SPICE
3I56 J 9 - 117 Jmol AstexViewer SPICE
3OW2 I 9 - 117 Jmol AstexViewer SPICE