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19  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: PPIF_HUMAN (P30405)

Summary

This is the summary of UniProt entry PPIF_HUMAN (P30405).

Description: Peptidyl-prolyl cis-trans isomerase F, mitochondrial EC=5.2.1.8
Source organism: Homo sapiens (Human) (NCBI taxonomy ID 9606)
View Pfam proteome data.
Length: 207 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
low_complexity n/a 31 44
disorder n/a 33 37
Pfam A Pro_isomerase 49 205

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P30405. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLALRCGSRW LGLLSVPRSV PLRLPAARAC SKGSGDPSSS SSSGNPLVYL
50
51
DVDANGKPLG RVVLELKADV VPKTAENFRA LCTGEKGFGY KGSTFHRVIP
100
101
SFMCQAGDFT NHNGTGGKSI YGSRFPDENF TLKHVGPGVL SMANAGPNTN
150
151
GSQFFICTIK TDWLDGKHVV FGHVKEGMDV VKKIESFGSK SGRTSKKIVI
200
201
TDCGQLS                                               
207
 

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Checksums:
CRC64:D7C76F1D4049F16A
MD5:78a02ed88feaec7a3efe83f41146efc5

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Pro_isomerase 49 - 205 2BIT X 7 - 163 Jmol AstexViewer SPICE
2BIU X 7 - 163 Jmol AstexViewer SPICE
2Z6W A 7 - 163 Jmol AstexViewer SPICE
B 7 - 163 Jmol AstexViewer SPICE
3QYU A 49 - 205 Jmol AstexViewer SPICE
3R49 A 49 - 205 Jmol AstexViewer SPICE
3R4G A 49 - 205 Jmol AstexViewer SPICE
3R54 A 49 - 205 Jmol AstexViewer SPICE
3R56 A 49 - 205 Jmol AstexViewer SPICE
3R57 A 49 - 205 Jmol AstexViewer SPICE
3R59 A 49 - 205 Jmol AstexViewer SPICE
3RCF A 49 - 205 Jmol AstexViewer SPICE
3RCG A 49 - 205 Jmol AstexViewer SPICE
3RCI X 49 - 205 Jmol AstexViewer SPICE
3RCK X 49 - 205 Jmol AstexViewer SPICE
3RCL A 49 - 205 Jmol AstexViewer SPICE
3RD9 X 49 - 205 Jmol AstexViewer SPICE
3RDA X 49 - 205 Jmol AstexViewer SPICE
3RDB A 49 - 205 Jmol AstexViewer SPICE
3RDC A 49 - 205 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.