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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: HN_NDVB (P32884)

Summary

This is the summary of UniProt entry HN_NDVB (P32884).

Description: Hemagglutinin-neuraminidase EC=3.2.1.18
Source organism: Newcastle disease virus (strain Beaudette C/45) (NDV) (NCBI taxonomy ID 11178)
Length: 577 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
transmembrane n/a 23 46
Pfam A HN 24 569
low_complexity n/a 27 45
disorder n/a 262 263
low_complexity n/a 508 530
disorder n/a 576 577

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P32884. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MDRAVSQVAL ENDEREAKNT WRLIFRIAIL LLTVVTLATS VASLVYSMGA
50
51
STPSDLVGIP TRISRAEEKI TSALGSNQDV VDRIYKQVAL ESPLALLNTE
100
101
TTIMNAITSL SYQINGAANN SGWGAPIHDP DFIGGIGKEL IVDDASDVTS
150
151
FYPSAFQEHL NFIPAPTTGS GCTRIPSFDM SATHYCYTHN VILSGCRDHS
200
201
HSHQYLALGV LRTTATGRIF FSTLRSISLD DTQNRKSCSV SATPLGCDML
250
251
CSKVTETEEE DYNSAVPTLM AHGRLGFDGQ YHEKDLDVTT LFEDWVANYP
300
301
GVGGGSFIDG RVWFSVYGGL KPNSPSDTVQ EGKYVIYKRY NDTCPDEQDY
350
351
QIRMAKSSYK PGRFGGKRIQ QAILSIKVST SLGEDPVLTV PPNTVTLMGA
400
401
EGRILTVGTS HFLYQRGSSY FSPALLYPMT VSNKTATLHS PYTFNAFTRP
450
451
GSIPCQASAR CPNSCVTGVY TDPYPLIFYR NHTLRGVFGT MLDSEQARLN
500
501
PTSAVFDSTS RSRITRVSSS STKAAYTTST CFKVVKTNKT YCLSIAEISN
550
551
TLFGEFRIVP LLVEILKNDG VREARSG                         
577
 

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Checksums:
CRC64:1D4C52B4887EC1A1
MD5:36b5edf6d13b295311f469eb145d3f3b

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
HN 124 - 569 1USR A 124 - 569 Jmol AstexViewer SPICE
B 124 - 569 Jmol AstexViewer SPICE
1USX A 124 - 569 Jmol AstexViewer SPICE
B 124 - 569 Jmol AstexViewer SPICE
C 124 - 569 Jmol AstexViewer SPICE