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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RSSA1_YEAST (P32905)

Summary

This is the summary of UniProt entry RSSA1_YEAST (P32905).

Description: 40S ribosomal protein S0-A
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 252 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_S2 17 117
Pfam A Ribosomal_S2 111 185
low_complexity n/a 208 245
disorder n/a 209 251
coiled_coil n/a 215 245

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P32905. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSLPATFDLT PEDAQLLLAA NTHLGARNVQ VHQEPYVFNA RPDGVHVINV
50
51
GKTWEKLVLA ARIIAAIPNP EDVVAISSRT FGQRAVLKFA AHTGATPIAG
100
101
RFTPGSFTNY ITRSFKEPRL VIVTDPRSDA QAIKEASYVN IPVIALTDLD
150
151
SPSEFVDVAI PCNNRGKHSI GLIWYLLARE VLRLRGALVD RTQPWSIMPD
200
201
LYFYRDPEEV EQQVAEEATT EEAGEEEAKE EVTEEQAEAT EWAEENADNV
250
251
EW                                                    
252
 

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Checksums:
CRC64:D6F263456282C771
MD5:f77527328e7cbb17d62091e692331eb7

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S2 111 - 185 1S1H B 110 - 184 Jmol AstexViewer SPICE
3IZB A 111 - 185 Jmol AstexViewer SPICE
3O2Z A 111 - 185 Jmol AstexViewer SPICE
3O30 A 111 - 185 Jmol AstexViewer SPICE
3U5C A 111 - 185 Jmol AstexViewer SPICE
3U5G A 111 - 185 Jmol AstexViewer SPICE
17 - 117 1S1H B 16 - 116 Jmol AstexViewer SPICE
3IZB A 17 - 117 Jmol AstexViewer SPICE
3O2Z A 17 - 117 Jmol AstexViewer SPICE
3O30 A 17 - 117 Jmol AstexViewer SPICE
3U5C A 17 - 117 Jmol AstexViewer SPICE
3U5G A 17 - 117 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.