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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RS20_YEAST (P38701)

Summary

This is the summary of UniProt entry RS20_YEAST (P38701).

Description: 40S ribosomal protein S20
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 121 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 8
low_complexity n/a 5 22
Pfam A Ribosomal_S10 22 118
disorder n/a 37 38
disorder n/a 62 70
disorder n/a 72 79

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P38701. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSDFQKEKVE EQEQQQQQII KIRITLTSTK VKQLENVSSN IVKNAEQHNL
50
51
VKKGPVRLPT KVLKISTRKT PNGEGSKTWE TYEMRIHKRY IDLEAPVQIV
100
101
KRITQITIEP GVDVEVVVAS N                               
121
 

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Checksums:
CRC64:8B1607EDB63017F1
MD5:b7c8c12a414232b74d31051ab63ec340

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S10 22 - 117 1S1H J 22 - 117 Jmol AstexViewer SPICE
22 - 118 3IZB J 22 - 118 Jmol AstexViewer SPICE
3O2Z N 22 - 118 Jmol AstexViewer SPICE
3O30 N 22 - 118 Jmol AstexViewer SPICE
3U5C U 22 - 118 Jmol AstexViewer SPICE
3U5G U 22 - 118 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.