Summary
This is the summary of UniProt entry NEPU_GEOSE (P38940).
| Description: | Neopullulanase EC=3.2.1.135 |
| Source organism: |
Geobacillus stearothermophilus (Bacillus stearothermophilus)
(NCBI taxonomy ID
1422)
|
| Length: | 588 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam A | Alpha-amylase_N | 1 | 121 |
| disorder | n/a | 152 | 159 |
| Pfam A | Alpha-amylase | 173 | 469 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession P38940. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MRKEAIYHRP ADNFAYAYDS ETLHLRLRTK KDDIDRVELL HGDPYDWQNG
50 51
AWQFQMMPMR KTGSDELFDY WFAEVKPPYR RLRYGFVLYS GEEKLVYTEK
100 101
GFYFEVPTDD TAYYFCFPFL HRVDLFEAPD WVKDTVWYQI FPERFANGNP
150 151
SISPEGSRPW GSEDPTPTSF FGGDLQGIID HLDYLVDLGI TGIYLTPIFR
200 201
SPSNHKYDTA DYFEVDPHFG DKETLKTLID RCHEKGIRVM LDAVFNHCGY
250 251
EFAPFQDVWK NGESSKYKDW FHIHEFPLQT EPRPNYDTFR FVPQMPKLNT
300 301
ANPEVKRYLL DVATYWIREF DIDGWRLDVA NEIDHEFWRE FRQEVKALKP
350 351
DVYILGEIWH DAMPWLRGDQ FDAVMNYPFT DGVLRFFAKE EISARQFANQ
400 401
MMHVLHSYPN NVNEAAFNLL GSHDTSRILT VCGGDIRKVK LLFLFQLTFT
450 451
GSPCIYYGDE IGMTGGNDPE CRKCMVWDPM QQNKELHQHV KQLIALRKQY
500 501
RSLRRGEISF LHADDEMNYL IYKKTDGDET VLVIINRSDQ KADIPIPLDA
550 551
RGTWLVNLLT GERFAAEAET LCTSLPPYGF VLYAIEHW
588
Show the unformatted sequence. |
| Checksums: |
CRC64:B2C7195D1CE34A33
MD5:de8263278afda551a7677edb97e2a1db
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Alpha-amylase | 173 - 469 | 1J0H | A | 173 - 469 | Jmol AstexViewer SPICE |
| B | 173 - 469 | Jmol AstexViewer SPICE | |||
| 1J0I | A | 173 - 469 | Jmol AstexViewer SPICE | ||
| B | 173 - 469 | Jmol AstexViewer SPICE | |||
| 1J0J | A | 173 - 469 | Jmol AstexViewer SPICE | ||
| B | 173 - 469 | Jmol AstexViewer SPICE | |||
| 1J0K | A | 173 - 469 | Jmol AstexViewer SPICE | ||
| B | 173 - 469 | Jmol AstexViewer SPICE | |||
| Alpha-amylase_N | 1 - 121 | 1J0H | A | 1 - 121 | Jmol AstexViewer SPICE |
| B | 1 - 121 | Jmol AstexViewer SPICE | |||
| 1J0I | A | 1 - 121 | Jmol AstexViewer SPICE | ||
| B | 1 - 121 | Jmol AstexViewer SPICE | |||
| 1J0J | A | 1 - 121 | Jmol AstexViewer SPICE | ||
| B | 1 - 121 | Jmol AstexViewer SPICE | |||
| 1J0K | A | 1 - 121 | Jmol AstexViewer SPICE | ||
| B | 1 - 121 | Jmol AstexViewer SPICE |