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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: RLA0_ORYSJ (P41095)

Summary

This is the summary of UniProt entry RLA0_ORYSJ (P41095).

Description: 60S acidic ribosomal protein P0
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 319 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L10 6 110
low_complexity n/a 116 128
Pfam A Ribosomal_60s 234 318
low_complexity n/a 279 312
disorder n/a 290 316

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P41095. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MAIKRTKAEK KVAYDKKLCQ LLDEYTKVLI AVADNVGSNQ LQEIRKGLRG
50
51
DSIVLMGKNT LIRRCIKVHA DNTGNKEFLE LMPLLVGNVG LIFTKGDLKE
100
101
VREEVAKYKV GAPARVGLVA PVDVVVPPGN TGLDPSQTSF FQVLNIPTKI
150
151
NKGTVEIITP VELIKKGDKV GSSESALLAK LGIRPFSYGL VITNVYDSGS
200
201
VFSPEVLDLT EDDLMEKFAS GVSMVASVSL AISYPTIAAA PHMFLNGYKN
250
251
VLAVAVETEY SYPHADKIKE YLKDPSKFAV AAPVAADSGA AAPSAAKEEE
300
301
KKEEPEEESD GDLGMSLFD                                  
319
 

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Checksums:
CRC64:F54E748B62C92DD7
MD5:d8420f0154398fd1db23ec673578b4f2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_60s 234 - 262 3IZR s 234 - 262 Jmol AstexViewer SPICE
Ribosomal_L10 6 - 110 3IZR s 6 - 110 Jmol AstexViewer SPICE