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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL10_YEAST (P41805)

Summary

This is the summary of UniProt entry RL10_YEAST (P41805).

Description: 60S ribosomal protein L10
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 221 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L16 5 167
disorder n/a 20 22
low_complexity n/a 54 68

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P41805. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MARRPARCYR YQKNKPYPKS RYNRAVPDSK IRIYDLGKKK ATVDEFPLCV
50
51
HLVSNELEQL SSEALEAARI CANKYMTTVS GRDAFHLRVR VHPFHVLRIN
100
101
KMLSCAGADR LQQGMRGAWG KPHGLAARVD IGQIIFSVRT KDSNKDVVVE
150
151
GLRRARYKFP GQQKIILSKK WGFTNLDRPE YLKKREAGEV KDDGAFVKFL
200
201
SKKGSLENNI REFPEYFAAQ A                               
221
 

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Checksums:
CRC64:6FF976A3800F347D
MD5:600f465fb9ed14a2eeefd0940e1047aa

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L16 5 - 167 1S1I I 5 - 167 Jmol AstexViewer SPICE
3IZS I 5 - 167 Jmol AstexViewer SPICE
3O58 J 5 - 167 Jmol AstexViewer SPICE
3O5H J 5 - 167 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.