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10  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: FPG_LACLC (P42371)

Summary

This is the summary of UniProt entry FPG_LACLC (P42371).

Description: Formamidopyrimidine-DNA glycosylase EC=3.2.2.23 EC=4.2.99.18
Source organism: Lactococcus lactis subsp. cremoris (Streptococcus cremoris) (NCBI taxonomy ID 1359)
Length: 273 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Fapy_DNA_glyco 2 116
Pfam A H2TH 132 225
Pfam A zf-FPG_IleRS 244 273

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P42371. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPELPEVETV RRELEKRIVG QKIISIEATY PRMVLTGFEQ LKKELTGKTI
50
51
QGISRRGKYL IFEIGDDFRL ISHLRMEGKY RLATLDAPRE KHDHLTMKFA
100
101
DGQLIYADVR KFGTWELIST DQVLPYFLKK KIGPEPTYDE DFDEKLFREK
150
151
LRKSTKKIKP YLLEQTLVAG LGNIYVDEVL WLAKIHPEKE TNQLIESSIH
200
201
LLHDSIIEIL QKAIKLGGSS IRTYSALGST GKMQNELQVY GKTGEKCSRC
250
251
GAEIQKIKVA GRGTHFCPVC QQK                             
273
 

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Checksums:
CRC64:EB16055C5E09840F
MD5:bde7b5ed1f9985e8943aac95c63c1ffa

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Fapy_DNA_glyco 2 - 116 1PJI A 1 - 115 Jmol AstexViewer SPICE
1PM5 A 1 - 115 Jmol AstexViewer SPICE
1XC8 A 1 - 115 Jmol AstexViewer SPICE
2XZF A 1 - 115 Jmol AstexViewer SPICE
2XZU A 1 - 115 Jmol AstexViewer SPICE
3C58 A 1 - 115 Jmol AstexViewer SPICE
3 - 116 1KFV A 2 - 115 Jmol AstexViewer SPICE
B 2 - 115 Jmol AstexViewer SPICE
1NNJ A 2 - 115 Jmol AstexViewer SPICE
1PJJ A 2 - 115 Jmol AstexViewer SPICE
1TDZ A 2 - 115 Jmol AstexViewer SPICE
H2TH 132 - 219 1KFV B 131 - 217 Jmol AstexViewer SPICE
132 - 220 2XZF A 131 - 218 Jmol AstexViewer SPICE
2XZU A 131 - 218 Jmol AstexViewer SPICE
132 - 221 1KFV A 131 - 219 Jmol AstexViewer SPICE
1NNJ A 131 - 219 Jmol AstexViewer SPICE
1TDZ A 131 - 219 Jmol AstexViewer SPICE
132 - 225 1PJI A 131 - 223 Jmol AstexViewer SPICE
1PJJ A 131 - 223 Jmol AstexViewer SPICE
1PM5 A 131 - 223 Jmol AstexViewer SPICE
1XC8 A 131 - 223 Jmol AstexViewer SPICE
3C58 A 131 - 223 Jmol AstexViewer SPICE
zf-FPG_IleRS 244 - 273 1KFV A 242 - 271 Jmol AstexViewer SPICE
B 242 - 271 Jmol AstexViewer SPICE
1NNJ A 242 - 271 Jmol AstexViewer SPICE
1PJI A 242 - 271 Jmol AstexViewer SPICE
1PJJ A 242 - 271 Jmol AstexViewer SPICE
1PM5 A 242 - 271 Jmol AstexViewer SPICE
1TDZ A 242 - 271 Jmol AstexViewer SPICE
1XC8 A 242 - 271 Jmol AstexViewer SPICE
2XZF A 242 - 271 Jmol AstexViewer SPICE
2XZU A 242 - 271 Jmol AstexViewer SPICE
3C58 A 242 - 271 Jmol AstexViewer SPICE