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8  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: END8_ECOLI (P50465)

Summary

This is the summary of UniProt entry END8_ECOLI (P50465).

Description: Endonuclease 8 EC=3.2.2.- EC=4.2.99.18
Source organism: Escherichia coli (strain K12) (NCBI taxonomy ID 83333)
View Pfam proteome data.
Length: 263 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 6
Pfam A Fapy_DNA_glyco 2 111
disorder n/a 9 12
disorder n/a 88 89
Pfam A H2TH 126 215
low_complexity n/a 190 203
Pfam A zf-FPG_IleRS 235 263

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P50465. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPEGPEIRRA ADNLEAAIKG KPLTDVWFAF PQLKPYQSQL IGQHVTHVET
50
51
RGKALLTHFS NDLTLYSHNQ LYGVWRVVDT GEEPQTTRVL RVKLQTADKT
100
101
ILLYSASDIE MLTPEQLTTH PFLQRVGPDV LDPNLTPEVV KERLLSPRFR
150
151
NRQFAGLLLD QAFLAGLGNY LRVEILWQVG LTGNHKAKDL NAAQLDALAH
200
201
ALLEIPRFSY ATRGQVDENK HHGALFRFKV FHRDGEPCER CGSIIEKTTL
250
251
SSRPFYWCPG CQH                                        
263
 

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Checksums:
CRC64:7D10B79F58ADDA24
MD5:8d4f5fd2e953748336a91be9d21b88fb

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Fapy_DNA_glyco 2 - 111 1K3W A 1 - 110 Jmol AstexViewer SPICE
1K3X A 1 - 110 Jmol AstexViewer SPICE
1Q3B A 1 - 110 Jmol AstexViewer SPICE
2EA0 A 1 - 110 Jmol AstexViewer SPICE
2OPF A 1 - 110 Jmol AstexViewer SPICE
4 - 111 1Q3C A 3 - 110 Jmol AstexViewer SPICE
2OQ4 A 3 - 110 Jmol AstexViewer SPICE
B 3 - 110 Jmol AstexViewer SPICE
5 - 111 1Q39 A 4 - 110 Jmol AstexViewer SPICE
H2TH 126 - 213 2OQ4 B 125 - 212 Jmol AstexViewer SPICE
126 - 214 1K3X A 125 - 213 Jmol AstexViewer SPICE
1Q3C A 125 - 213 Jmol AstexViewer SPICE
2OQ4 A 125 - 213 Jmol AstexViewer SPICE
126 - 215 1K3W A 125 - 214 Jmol AstexViewer SPICE
1Q39 A 125 - 214 Jmol AstexViewer SPICE
1Q3B A 125 - 214 Jmol AstexViewer SPICE
2EA0 A 125 - 214 Jmol AstexViewer SPICE
2OPF A 125 - 214 Jmol AstexViewer SPICE
zf-FPG_IleRS 235 - 262 1Q39 A 234 - 261 Jmol AstexViewer SPICE
1Q3B A 234 - 261 Jmol AstexViewer SPICE
1Q3C A 234 - 261 Jmol AstexViewer SPICE
235 - 263 1K3W A 234 - 262 Jmol AstexViewer SPICE
1K3X A 234 - 262 Jmol AstexViewer SPICE
2EA0 A 234 - 262 Jmol AstexViewer SPICE
2OPF A 234 - 262 Jmol AstexViewer SPICE
2OQ4 A 234 - 262 Jmol AstexViewer SPICE
B 234 - 262 Jmol AstexViewer SPICE