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6  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CY552_PARDE (P54820)

Summary

This is the summary of UniProt entry CY552_PARDE (P54820).

Description: Cytochrome c-552
Source organism: Paracoccus denitrificans (NCBI taxonomy ID 266)
Length: 176 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 27
low_complexity n/a 10 29
disorder n/a 37 38
disorder n/a 43 53
low_complexity n/a 53 70
disorder n/a 58 59
disorder n/a 61 63
Pfam A Cytochrom_C 80 176
disorder n/a 125 126
disorder n/a 128 129
disorder n/a 133 137

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P54820. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MFDTMTVTKA AGALIGSLLF LLLMSWAASG IFHVGTSGHG AEGEEHAQAY
50
51
TYPVESAGGA EGEAVDEGPD FATVLASADP AAGEKVFGKC KACHKLDGND
100
101
GVGPHLNGVV GRTVAGVDGF NYSDPMKAHG GDWTPEALQE FLTNPKAVVK
150
151
GTKMAFAGLP KIEDRANLIA YLEGQQ                          
176
 

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Checksums:
CRC64:99FE93503FBC2855
MD5:9dd16e6e1dd0049b4a1b647b9a0a395f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Cytochrom_C 80 - 176 1C7M A 4 - 100 Jmol AstexViewer SPICE
1I6D A 4 - 100 Jmol AstexViewer SPICE
1I6E A 4 - 100 Jmol AstexViewer SPICE
1QL3 A 4 - 100 Jmol AstexViewer SPICE
B 4 - 100 Jmol AstexViewer SPICE
C 4 - 100 Jmol AstexViewer SPICE
D 4 - 100 Jmol AstexViewer SPICE
1QL4 A 4 - 100 Jmol AstexViewer SPICE
B 4 - 100 Jmol AstexViewer SPICE
C 4 - 100 Jmol AstexViewer SPICE
D 4 - 100 Jmol AstexViewer SPICE
3M97 X 44 - 140 Jmol AstexViewer SPICE