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2  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RPOA2_SULSO (P58192)

Summary

This is the summary of UniProt entry RPOA2_SULSO (P58192).

Description: DNA-directed RNA polymerase subunit A'' EC=2.7.7.6
Source organism: Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (NCBI taxonomy ID 273057)
View Pfam proteome data.
Length: 392 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A RNA_pol_Rpb1_5 19 341
low_complexity n/a 172 183
low_complexity n/a 227 235
low_complexity n/a 283 294

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P58192. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MIDEKDKPYL EEKVKQASNI LPQKIVDDLK NLILNKEIIV TRDEIDKIFD
50
51
LAIKEYSEGL IAPGEAIGIV AAQSVGEPGT QMTLRTFHFA GIRELNVTLG
100
101
LPRLIEIVDA KKVPSTPMMT IYLTDEYKRD RDKALEVARK LEYTKIENVV
150
151
SSTSIDIASM SIILQLDNEM LKDKGVTVDD VKKAIGRLKL GDFMIEESED
200
201
STLNINFANI DSIAALFKLR DKILNTKIKG IKGIKRAIVQ KKGDEYIILT
250
251
DGSNLSGVLS VKGVDVAKVE TNNIREIEEV FGIEAAREII IREISKVLAE
300
301
QGLDVDIRHI LLIADVMTRT GIVRQIGRHG VTGEKNSVLA RAAFEVTVKH
350
351
LLDAAARGDV EEFKGVVENI IIGHPIKLGT GMVELTMRPI LR        
392
 

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Checksums:
CRC64:5B0E871D056CE08B
MD5:99ab7dbfcaf15390875fb9e2e963f938

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RNA_pol_Rpb1_5 19 - 341 2PMZ C 22 - 344 Jmol AstexViewer SPICE
G 22 - 344 Jmol AstexViewer SPICE
3HKZ C 22 - 344 Jmol AstexViewer SPICE
M 22 - 344 Jmol AstexViewer SPICE