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70  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL13_THET8 (P60488)

Summary

This is the summary of UniProt entry RL13_THET8 (P60488).

Description: 50S ribosomal protein L13
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (NCBI taxonomy ID 300852)
View Pfam proteome data.
Length: 140 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L13 13 140
disorder n/a 102 104
disorder n/a 123 140

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P60488. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKTYVPKQVE PRWVLIDAEG KTLGRLATKI ATLLRGKHRP DWTPNVAMGD
50
51
FVVVVNADKI RVTGKKLEQK IYTRYSGYPG GLKKIPLEKM LATHPERVLE
100
101
HAVKGMLPKG PLGRRLFKRL KVYAGPDHPH QAQRPEKLEV           
140
 

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Checksums:
CRC64:657212AE35E6F502
MD5:393eb61a43858918b62ac34c60acf34f

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L13 13 - 138 2XQE N 13 - 138 Jmol AstexViewer SPICE
2XUX N 13 - 138 Jmol AstexViewer SPICE
2Y0V N 13 - 138 Jmol AstexViewer SPICE
2Y0X N 13 - 138 Jmol AstexViewer SPICE
2Y0Z N 13 - 138 Jmol AstexViewer SPICE
2Y11 N 13 - 138 Jmol AstexViewer SPICE
2Y13 N 13 - 138 Jmol AstexViewer SPICE
2Y15 N 13 - 138 Jmol AstexViewer SPICE
2Y17 N 13 - 138 Jmol AstexViewer SPICE
2Y19 N 13 - 138 Jmol AstexViewer SPICE
3I8F M 13 - 138 Jmol AstexViewer SPICE
3I8I M 13 - 138 Jmol AstexViewer SPICE
3I9C M 13 - 138 Jmol AstexViewer SPICE
3I9E M 13 - 138 Jmol AstexViewer SPICE
3KIR N 13 - 138 Jmol AstexViewer SPICE
3KIT N 13 - 138 Jmol AstexViewer SPICE
3KIW N 13 - 138 Jmol AstexViewer SPICE
3KIY N 13 - 138 Jmol AstexViewer SPICE
3TVE M 13 - 138 Jmol AstexViewer SPICE
3TVH M 13 - 138 Jmol AstexViewer SPICE
3UYE M 13 - 138 Jmol AstexViewer SPICE
3UYG M 13 - 138 Jmol AstexViewer SPICE
3UZ1 M 13 - 138 Jmol AstexViewer SPICE
3UZ2 M 13 - 138 Jmol AstexViewer SPICE
3UZ8 M 13 - 138 Jmol AstexViewer SPICE
3UZ9 M 13 - 138 Jmol AstexViewer SPICE
3UZF M 13 - 138 Jmol AstexViewer SPICE
3UZH M 13 - 138 Jmol AstexViewer SPICE
3UZK M 13 - 138 Jmol AstexViewer SPICE
3UZN M 13 - 138 Jmol AstexViewer SPICE
13 - 139 2J01 N 13 - 139 Jmol AstexViewer SPICE
2J03 N 13 - 139 Jmol AstexViewer SPICE
2V47 N 13 - 139 Jmol AstexViewer SPICE
2V49 N 13 - 139 Jmol AstexViewer SPICE
2WDI N 13 - 139 Jmol AstexViewer SPICE
2WDJ N 13 - 139 Jmol AstexViewer SPICE
2WDL N 13 - 139 Jmol AstexViewer SPICE
2WDN N 13 - 139 Jmol AstexViewer SPICE
2WH2 N 13 - 139 Jmol AstexViewer SPICE
2WH4 N 13 - 139 Jmol AstexViewer SPICE
2WRJ N 13 - 139 Jmol AstexViewer SPICE
2WRL N 13 - 139 Jmol AstexViewer SPICE
2WRO N 13 - 139 Jmol AstexViewer SPICE
2WRR N 13 - 139 Jmol AstexViewer SPICE
2X9S N 13 - 139 Jmol AstexViewer SPICE
2X9U N 13 - 139 Jmol AstexViewer SPICE
2XG0 N 13 - 139 Jmol AstexViewer SPICE
2XG2 N 13 - 139 Jmol AstexViewer SPICE
3FIN N 13 - 139 Jmol AstexViewer SPICE
3HUX N 13 - 139 Jmol AstexViewer SPICE
3HUZ N 13 - 139 Jmol AstexViewer SPICE
3KNI N 13 - 139 Jmol AstexViewer SPICE
3KNK N 13 - 139 Jmol AstexViewer SPICE
3KNM N 13 - 139 Jmol AstexViewer SPICE
3KNO N 13 - 139 Jmol AstexViewer SPICE
3ZVP N 13 - 139 Jmol AstexViewer SPICE
4ABS N 13 - 139 Jmol AstexViewer SPICE
13 - 140 2HGJ M 13 - 140 Jmol AstexViewer SPICE
2HGQ M 13 - 140 Jmol AstexViewer SPICE
2HGU M 13 - 140 Jmol AstexViewer SPICE
3UXQ N 13 - 140 Jmol AstexViewer SPICE
3UXR N 13 - 140 Jmol AstexViewer SPICE
3V23 N 13 - 140 Jmol AstexViewer SPICE
3V25 N 13 - 140 Jmol AstexViewer SPICE
3V27 N 13 - 140 Jmol AstexViewer SPICE
3V29 N 13 - 140 Jmol AstexViewer SPICE
3V2D N 13 - 140 Jmol AstexViewer SPICE
3V2F N 13 - 140 Jmol AstexViewer SPICE
4DHA N 13 - 140 Jmol AstexViewer SPICE
4DHC N 13 - 140 Jmol AstexViewer SPICE