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71  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL16_THET8 (P60489)

Summary

This is the summary of UniProt entry RL16_THET8 (P60489).

Description: 50S ribosomal protein L16
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (NCBI taxonomy ID 300852)
View Pfam proteome data.
Length: 141 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L16 4 133
disorder n/a 13 14
disorder n/a 80 81

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P60489. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLMPRRMKYR KQQRGRLKGA TKGGDYVAFG DYGLVALEPA WITAQQIEAA
50
51
RVAMVRHFRR GGKIFIRIFP DKPYTKKPLE VRMGKGKGNV EGYVAVVKPG
100
101
RVMFEVAGVT EEQAMEALRI AGHKLPIKTK IVRRDAYDEA Q         
141
 

Show the unformatted sequence.

Checksums:
CRC64:046579FBF9158EB2
MD5:9f457189f186aa5014a464daa7c04c92

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L16 4 - 133 1WKI A 4 - 133 Jmol AstexViewer SPICE
2HGJ P 4 - 133 Jmol AstexViewer SPICE
2HGQ P 4 - 133 Jmol AstexViewer SPICE
2HGU P 4 - 133 Jmol AstexViewer SPICE
2J01 Q 4 - 133 Jmol AstexViewer SPICE
2J03 Q 4 - 133 Jmol AstexViewer SPICE
2V47 Q 4 - 133 Jmol AstexViewer SPICE
2V49 Q 4 - 133 Jmol AstexViewer SPICE
2WDI Q 4 - 133 Jmol AstexViewer SPICE
2WDJ Q 4 - 133 Jmol AstexViewer SPICE
2WDL Q 4 - 133 Jmol AstexViewer SPICE
2WDN Q 4 - 133 Jmol AstexViewer SPICE
2WH2 Q 4 - 133 Jmol AstexViewer SPICE
2WH4 Q 4 - 133 Jmol AstexViewer SPICE
2WRJ Q 4 - 133 Jmol AstexViewer SPICE
2WRL Q 4 - 133 Jmol AstexViewer SPICE
2WRO Q 4 - 133 Jmol AstexViewer SPICE
2WRR Q 4 - 133 Jmol AstexViewer SPICE
2X9S Q 4 - 133 Jmol AstexViewer SPICE
2X9U Q 4 - 133 Jmol AstexViewer SPICE
2XG0 Q 4 - 133 Jmol AstexViewer SPICE
2XG2 Q 4 - 133 Jmol AstexViewer SPICE
2XQE Q 4 - 133 Jmol AstexViewer SPICE
2XUX Q 4 - 133 Jmol AstexViewer SPICE
2Y0V Q 4 - 133 Jmol AstexViewer SPICE
2Y0X Q 4 - 133 Jmol AstexViewer SPICE
2Y0Z Q 4 - 133 Jmol AstexViewer SPICE
2Y11 Q 4 - 133 Jmol AstexViewer SPICE
2Y13 Q 4 - 133 Jmol AstexViewer SPICE
2Y15 Q 4 - 133 Jmol AstexViewer SPICE
2Y17 Q 4 - 133 Jmol AstexViewer SPICE
2Y19 Q 4 - 133 Jmol AstexViewer SPICE
3HUX Q 4 - 133 Jmol AstexViewer SPICE
3HUZ Q 4 - 133 Jmol AstexViewer SPICE
3I8F P 4 - 133 Jmol AstexViewer SPICE
3I8I P 4 - 133 Jmol AstexViewer SPICE
3I9C P 4 - 133 Jmol AstexViewer SPICE
3I9E P 4 - 133 Jmol AstexViewer SPICE
3KIR Q 4 - 133 Jmol AstexViewer SPICE
3KIT Q 4 - 133 Jmol AstexViewer SPICE
3KIW Q 4 - 133 Jmol AstexViewer SPICE
3KIY Q 4 - 133 Jmol AstexViewer SPICE
3KNI Q 4 - 133 Jmol AstexViewer SPICE
3KNK Q 4 - 133 Jmol AstexViewer SPICE
3KNM Q 4 - 133 Jmol AstexViewer SPICE
3KNO Q 4 - 133 Jmol AstexViewer SPICE
3TVE P 4 - 133 Jmol AstexViewer SPICE
3TVH P 4 - 133 Jmol AstexViewer SPICE
3UXQ Q 4 - 133 Jmol AstexViewer SPICE
3UXR Q 4 - 133 Jmol AstexViewer SPICE
3UYE P 4 - 133 Jmol AstexViewer SPICE
3UYG P 4 - 133 Jmol AstexViewer SPICE
3UZ1 P 4 - 133 Jmol AstexViewer SPICE
3UZ2 P 4 - 133 Jmol AstexViewer SPICE
3UZ8 P 4 - 133 Jmol AstexViewer SPICE
3UZ9 P 4 - 133 Jmol AstexViewer SPICE
3UZF P 4 - 133 Jmol AstexViewer SPICE
3UZH P 4 - 133 Jmol AstexViewer SPICE
3UZK P 4 - 133 Jmol AstexViewer SPICE
3UZN P 4 - 133 Jmol AstexViewer SPICE
3V23 Q 4 - 133 Jmol AstexViewer SPICE
3V25 Q 4 - 133 Jmol AstexViewer SPICE
3V27 Q 4 - 133 Jmol AstexViewer SPICE
3V29 Q 4 - 133 Jmol AstexViewer SPICE
3V2D Q 4 - 133 Jmol AstexViewer SPICE
3V2F Q 4 - 133 Jmol AstexViewer SPICE
3ZVP Q 4 - 133 Jmol AstexViewer SPICE
4ABS Q 4 - 133 Jmol AstexViewer SPICE
4DHA Q 4 - 133 Jmol AstexViewer SPICE
4DHC Q 4 - 133 Jmol AstexViewer SPICE
6 - 133 3FIN Q 6 - 133 Jmol AstexViewer SPICE