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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: NANA_STRR6 (P62576)

Summary

This is the summary of UniProt entry NANA_STRR6 (P62576).

Description: Sialidase A EC=3.2.1.18
Source organism: Streptococcus pneumoniae (strain ATCC BAA-255 / R6) (NCBI taxonomy ID 171101)
View Pfam proteome data.
Length: 1035 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 4 17
Pfam A YSIRK_signal 21 47
transmembrane n/a 32 53
disorder n/a 52 110
low_complexity n/a 93 105
Pfam A Sialidase 118 309
disorder n/a 121 144
low_complexity n/a 138 150
disorder n/a 150 152
disorder n/a 154 155
disorder n/a 199 201
disorder n/a 206 208
disorder n/a 226 227
disorder n/a 303 305
disorder n/a 307 310
Pfam B Pfam-B_916 311 490
disorder n/a 324 336
disorder n/a 341 345
disorder n/a 391 408
disorder n/a 411 417
disorder n/a 476 479
disorder n/a 601 603
Pfam A BNR 607 618
disorder n/a 618 649
disorder n/a 712 714
disorder n/a 723 727
disorder n/a 799 800
Pfam B Pfam-B_1411 817 900
disorder n/a 859 867
disorder n/a 874 982
Pfam B Pfam-B_1411 956 1024
disorder n/a 988 991
disorder n/a 994 1011
transmembrane n/a 1013 1030
low_complexity n/a 1013 1030

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P62576. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MSYFRNRDID IERNSMNRSV QERKCRYSIR KLSVGAVSMI VGAVVFGTSP
50
51
VLAQEGASEQ PLANETQLSG ESSTLTDTEK SQPSSETELS GNKQEQERKD
100
101
KQEEKIPRDY YARDLENVET VIEKEDVETN ASNGQRVDLS SELDKLKKLE
150
151
NATVHMEFKP DAKAPAFYNL FSVSSATKKD EYFTMAVYNN TATLEGRGSD
200
201
GKQFYNNYND APLKVKPGQW NSVTFTVEKP TAELPKGRVR LYVNGVLSRT
250
251
SLRSGNFIKD MPDVTHVQIG ATKRANNTVW GSNLQIRNLT VYNRALTPEE
300
301
VQKRSQLFKR SDLEKKLPEG AALTEKTDIF ESGRNGKPNK DGIKSYRIPA
350
351
LLKTDKGTLI AGADERRLHS SDWGDIGMVI RRSEDNGKTW GDRVTITNLR
400
401
DNPKASDPSI GSPVNIDMVL VQDPETKRIF SIYDMFPEGK GIFGMSSQKE
450
451
EAYKKIDGKT YQILYREGEK GAYTIRENGT VYTPDGKATD YRVVVDPVKP
500
501
AYSDKGDLYK GNQLLGNIYF TTNKTSPFRI AKDSYLWMSY SDDDGKTWSA
550
551
PQDITPMVKA DWMKFLGVGP GTGIVLRNGP HKGRILIPVY TTNNVSHLNG
600
601
SQSSRIIYSD DHGKTWHAGE AVNDNRQVDG QKIHSSTMNN RRAQNTESTV
650
651
VQLNNGDVKL FMRGLTGDLQ VATSKDGGVT WEKDIKRYPQ VKDVYVQMSA
700
701
IHTMHEGKEY IILSNAGGPK RENGMVHLAR VEENGELTWL KHNPIQKGEF
750
751
AYNSLQELGN GEYGILYEHT EKGQNAYTLS FRKFNWDFLS KDLISPTEAK
800
801
VKRTREMGKG VIGLEFDSEV LVNKAPTLQL ANGKTARFMT QYDTKTLLFT
850
851
VDSEDMGQKV TGLAEGAIES MHNLPVSVAG TKLSNGMNGS EAAVHEVPEY
900
901
TGPLGTSGEE PAPTVEKPEY TGPLGTSGEE PAPTVEKPEY TGPLGTAGEE
950
951
AAPTVEKPEF TGGVNGTEPA VHEIAEYKGS DSLVTLTTKE DYTYKAPLAQ
1000
1001
QALPETGNKE SDLLASLGLT AFFLGLFTLG KKREQ                
1035
 

Show the unformatted sequence.

Checksums:
CRC64:C5B8A2D7A12E12F3
MD5:10866d349b6fca837fe416f0101f863b

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
BNR 607 - 618 2W20 A 607 - 618 Jmol AstexViewer SPICE
B 607 - 618 Jmol AstexViewer SPICE
3H71 A 607 - 618 Jmol AstexViewer SPICE
B 607 - 618 Jmol AstexViewer SPICE
3H72 A 607 - 618 Jmol AstexViewer SPICE
B 607 - 618 Jmol AstexViewer SPICE
3H73 A 607 - 618 Jmol AstexViewer SPICE
B 607 - 618 Jmol AstexViewer SPICE