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5  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RBS_TOBAC (P69249)

Summary

This is the summary of UniProt entry RBS_TOBAC (P69249).

Description: Ribulose bisphosphate carboxylase small chain, chloroplastic EC=4.1.1.39
Source organism: Nicotiana tabacum (Common tobacco) (NCBI taxonomy ID 4097)
Length: 180 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 20
Pfam A RbcS 2 44
low_complexity n/a 2 12
Pfam A RuBisCO_small 68 178

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P69249. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MASSVLSSAA VATRSNVAQA NMVAPFTGLK SAASFPVSRK QNLDITSIAS
50
51
NGGRVQCMQV WPPINKKKYE TLSYLPDLSQ EQLLSEVEYL LKNGWVPCLE
100
101
FETEHGFVYR ENNKSPGYYD GRYWTMWKLP MFGCTDATQV LAEVEEAKKA
150
151
YPQAWIRIIG FDNVRQVQCI SFIAYKPEGY                      
180
 

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Checksums:
CRC64:26CF3F48EF0860AD
MD5:6f78de7871288f422b88278f98b3ee23

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
RuBisCO_small 68 - 178 1EJ7 S 511 - 621 Jmol AstexViewer SPICE
1RLC S 11 - 121 Jmol AstexViewer SPICE
1RLD S 511 - 621 Jmol AstexViewer SPICE
T 511 - 621 Jmol AstexViewer SPICE
3RUB S 11 - 121 Jmol AstexViewer SPICE
4RUB S 11 - 121 Jmol AstexViewer SPICE
T 11 - 121 Jmol AstexViewer SPICE
U 11 - 121 Jmol AstexViewer SPICE
V 11 - 121 Jmol AstexViewer SPICE