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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: P71454_LEUME (P71454)

Summary

This is the summary of UniProt entry P71454_LEUME (P71454).

Description: D-alanine--D-alanine ligase 1 EC=6.3.2.4
Source organism: Leuconostoc mesenteroides (NCBI taxonomy ID 1245)
Length: 377 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Dala_Dala_lig_N 4 125
Pfam A Dala_Dala_lig_C 142 349
disorder n/a 241 242

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P71454. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTKKRVALIF GGNSSEHDVS KRSAQNFYNA IEATGKYEII VFAIAQNGFF
50
51
LDTESSKKIL ALEDEQPIVD AFMKTVDASD PLARIHALKS AGDFDIFFPV
100
101
VHGNLGEDGT LQGLFKLLDK PYVGAPLRGH AVSFDKALTK ELLTVNGIRN
150
151
TKYIVVDPES ANNWSWDKIV AELGNIVFVK AANQGSSVGI SRVTNAEEYT
200
201
EALSDSFQYD YKVLIEEAVN GARELEVGVI GNDQPLVSEI GAHTVPNQGS
250
251
GDGWYDYNNK FVDNSAVHFE IPAQLSPEVT KEVKQMALDA YKVLNLRGEA
300
301
RMDFLLDENN VPYLGEPNTL PGFTNMSLFK RLWDYSDINN AKLVDMLIDY
350
351
GFEDFAQNKK LSYSFVSLGE EKIGKFN                         
377
 

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Checksums:
CRC64:D1C6A40A6812AE01
MD5:f420c9d4dbc9d75af9c19f1f644a4614

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Dala_Dala_lig_C 142 - 349 1EHI A 142 - 349 Jmol AstexViewer SPICE
B 542 - 749 Jmol AstexViewer SPICE
Dala_Dala_lig_N 4 - 125 1EHI A 4 - 125 Jmol AstexViewer SPICE
B 404 - 525 Jmol AstexViewer SPICE