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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: COX2_THETH (P98052)

Summary

This is the summary of UniProt entry COX2_THETH (P98052).

Description: Cytochrome c oxidase subunit 2 EC=1.9.3.1 (Fragment)
Source organism: Thermus thermophilus (NCBI taxonomy ID 274)
Length: 135 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 23 26
disorder n/a 31 34
Pfam A COX2 47 134

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession P98052. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
AYTLATHTAG VIPAGKLERV DPTTVRQEGP WADPAQAVVQ TGPNQYTVYV
50
51
LAFAFGYQPN PIEVPQGAEI VFKITSPDVI HGFHVEGTNI NVEVLPGEVS
100
101
TVRYTFKRPG EYRIICNQYC GLGHQNMFGT IVVKE                
135
 

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Checksums:
CRC64:786895A803A52FAB
MD5:72bb118eaddf2cb42d238977d2776e5c

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
COX2 47 - 134 1XME B 80 - 167 Jmol AstexViewer SPICE
2CUA A 80 - 167 Jmol AstexViewer SPICE
B 80 - 167 Jmol AstexViewer SPICE
2FWL B 80 - 167 Jmol AstexViewer SPICE
2LLN A 38 - 125 Jmol AstexViewer SPICE