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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CAB6_ARATH (Q01667)

Summary

This is the summary of UniProt entry CAB6_ARATH (Q01667).

Description: Chlorophyll a-b binding protein 6, chloroplastic
Source organism: Arabidopsis thaliana (Mouse-ear cress) (NCBI taxonomy ID 3702)
View Pfam proteome data.
Length: 241 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
low_complexity n/a 17 25
Pfam A Chloroa_b-bind 54 210
transmembrane n/a 93 113
transmembrane n/a 133 152
disorder n/a 162 165
low_complexity n/a 179 193

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q01667. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MASNSLMSCG IAAVYPSLLS SSKSKFVSAG VPLPNAGNVG RIRMAAHWMP
50
51
GEPRPAYLDG SAPGDFGFDP LGLGEVPANL ERYKESELIH CRWAMLAVPG
100
101
ILVPEALGYG NWVKAQEWAA LPGGQATYLG NPVPWGTLPT ILAIEFLAIA
150
151
FVEHQRSMEK DPEKKKYPGG AFDPLGYSKD PKKLEELKVK EIKNGRLALL
200
201
AFVGFCVQQS AYPGTGPLEN LATHLADPWH NNIGDIVIPF N         
241
 

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Checksums:
CRC64:2F5EE06B55A979CE
MD5:2dc6068759424c02e5568eb82bc77db2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Chloroa_b-bind 54 - 210 2O01 1 10 - 166 Jmol AstexViewer SPICE
61 - 210 2WSC 1 17 - 166 Jmol AstexViewer SPICE
2WSE 1 17 - 166 Jmol AstexViewer SPICE
2WSF 1 17 - 166 Jmol AstexViewer SPICE