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7  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: NOTC1_MOUSE (Q01705)

Summary

This is the summary of UniProt entry NOTC1_MOUSE (Q01705).

Description: Neurogenic locus notch homolog protein 1
Source organism: Mus musculus (Mouse)
Length: 2531 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 18
low_complexity n/a 2 20
Pfam A EGF 63 97
Pfam A EGF 106 137
Pfam A EGF 144 174
Pfam A EGF_CA 178 216
Pfam A EGF 222 253
Pfam A EGF 261 291
Pfam A EGF_CA 295 335
Pfam A hEGF 397 409
Pfam A hEGF 437 449
Pfam A EGF_CA 452 491
Pfam A EGF 494 524
Pfam A EGF 532 562
Pfam A EGF 570 599
Pfam A EGF 607 637
Pfam A EGF 645 673
Pfam A EGF 675 712
Pfam A EGF 720 749
Pfam A EGF 757 787
Pfam A EGF 795 825
Pfam A EGF_CA 869 906
Pfam A EGF 911 941
Pfam A EGF 949 979
Pfam A EGF 987 1017
Pfam A EGF 1025 1055
Pfam A EGF 1063 1093
Pfam A EGF 1112 1141
Pfam A EGF 1149 1179
Pfam A EGF 1187 1217
Pfam A EGF 1225 1263
Pfam A hEGF 1333 1345
Pfam A Notch 1444 1480
Pfam A Notch 1485 1522
Pfam A Notch 1524 1562
Pfam A NOD 1566 1622
low_complexity n/a 1574 1580
Pfam A NODP 1660 1722
low_complexity n/a 1674 1685
low_complexity n/a 1690 1702
transmembrane n/a 1726 1746
low_complexity n/a 1729 1746
disorder n/a 1769 1772
disorder n/a 1774 1786
disorder n/a 1788 1791
disorder n/a 1793 1803
disorder n/a 1805 1809
disorder n/a 1824 1865
disorder n/a 1877 1898
Pfam A Ank_2 1892 1982
disorder n/a 1915 1925
Pfam A Ank_2 1936 2015
disorder n/a 1951 1955
Pfam A Ank_2 1966 2048
low_complexity n/a 2025 2036
disorder n/a 2042 2044
disorder n/a 2048 2057
Pfam A Ank 2050 2082
disorder n/a 2082 2083
disorder n/a 2085 2088
disorder n/a 2090 2091
disorder n/a 2113 2123
disorder n/a 2130 2134
disorder n/a 2136 2187
disorder n/a 2191 2238
low_complexity n/a 2205 2222
disorder n/a 2248 2272
disorder n/a 2280 2282
disorder n/a 2284 2288
disorder n/a 2299 2301
disorder n/a 2304 2305
disorder n/a 2307 2341
disorder n/a 2348 2349
disorder n/a 2355 2357
disorder n/a 2360 2531
low_complexity n/a 2364 2395
Pfam A DUF3454 2453 2517
low_complexity n/a 2488 2503

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q01705. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPRLLTPLLC LTLLPALAAR GLRCSQPSGT CLNGGRCEVA NGTEACVCSG
50
51
AFVGQRCQDS NPCLSTPCKN AGTCHVVDHG GTVDYACSCP LGFSGPLCLT
100
101
PLDNACLANP CRNGGTCDLL TLTEYKCRCP PGWSGKSCQQ ADPCASNPCA
150
151
NGGQCLPFES SYICRCPPGF HGPTCRQDVN ECSQNPGLCR HGGTCHNEIG
200
201
SYRCACRATH TGPHCELPYV PCSPSPCQNG GTCRPTGDTT HECACLPGFA
250
251
GQNCEENVDD CPGNNCKNGG ACVDGVNTYN CRCPPEWTGQ YCTEDVDECQ
300
301
LMPNACQNGG TCHNTHGGYN CVCVNGWTGE DCSENIDDCA SAACFQGATC
350
351
HDRVASFYCE CPHGRTGLLC HLNDACISNP CNEGSNCDTN PVNGKAICTC
400
401
PSGYTGPACS QDVDECALGA NPCEHAGKCL NTLGSFECQC LQGYTGPRCE
450
451
IDVNECISNP CQNDATCLDQ IGEFQCICMP GYEGVYCEIN TDECASSPCL
500
501
HNGHCMDKIN EFQCQCPKGF NGHLCQYDVD ECASTPCKNG AKCLDGPNTY
550
551
TCVCTEGYTG THCEVDIDEC DPDPCHYGSC KDGVATFTCL CQPGYTGHHC
600
601
ETNINECHSQ PCRHGGTCQD RDNSYLCLCL KGTTGPNCEI NLDDCASNPC
650
651
DSGTCLDKID GYECACEPGY TGSMCNVNID ECAGSPCHNG GTCEDGIAGF
700
701
TCRCPEGYHD PTCLSEVNEC NSNPCIHGAC RDGLNGYKCD CAPGWSGTNC
750
751
DINNNECESN PCVNGGTCKD MTSGYVCTCR EGFSGPNCQT NINECASNPC
800
801
LNQGTCIDDV AGYKCNCPLP YTGATCEVVL APCATSPCKN SGVCKESEDY
850
851
ESFSCVCPTG WQGQTCEVDI NECVKSPCRH GASCQNTNGS YRCLCQAGYT
900
901
GRNCESDIDD CRPNPCHNGG SCTDGINTAF CDCLPGFQGA FCEEDINECA
950
951
SNPCQNGANC TDCVDSYTCT CPVGFNGIHC ENNTPDCTES SCFNGGTCVD
1000
1001
GINSFTCLCP PGFTGSYCQY DVNECDSRPC LHGGTCQDSY GTYKCTCPQG
1050
1051
YTGLNCQNLV RWCDSAPCKN GGRCWQTNTQ YHCECRSGWT GVNCDVLSVS
1100
1101
CEVAAQKRGI DVTLLCQHGG LCVDEGDKHY CHCQAGYTGS YCEDEVDECS
1150
1151
PNPCQNGATC TDYLGGFSCK CVAGYHGSNC SEEINECLSQ PCQNGGTCID
1200
1201
LTNSYKCSCP RGTQGVHCEI NVDDCHPPLD PASRSPKCFN NGTCVDQVGG
1250
1251
YTCTCPPGFV GERCEGDVNE CLSNPCDPRG TQNCVQRVND FHCECRAGHT
1300
1301
GRRCESVING CRGKPCKNGG VCAVASNTAR GFICRCPAGF EGATCENDAR
1350
1351
TCGSLRCLNG GTCISGPRSP TCLCLGSFTG PECQFPASSP CVGSNPCYNQ
1400
1401
GTCEPTSENP FYRCLCPAKF NGLLCHILDY SFTGGAGRDI PPPQIEEACE
1450
1451
LPECQVDAGN KVCNLQCNNH ACGWDGGDCS LNFNDPWKNC TQSLQCWKYF
1500
1501
SDGHCDSQCN SAGCLFDGFD CQLTEGQCNP LYDQYCKDHF SDGHCDQGCN
1550
1551
SAECEWDGLD CAEHVPERLA AGTLVLVVLL PPDQLRNNSF HFLRELSHVL
1600
1601
HTNVVFKRDA QGQQMIFPYY GHEEELRKHP IKRSTVGWAT SSLLPGTSGG
1650
1651
RQRRELDPMD IRGSIVYLEI DNRQCVQSSS QCFQSATDVA AFLGALASLG
1700
1701
SLNIPYKIEA VKSEPVEPPL PSQLHLMYVA AAAFVLLFFV GCGVLLSRKR
1750
1751
RRQHGQLWFP EGFKVSEASK KKRREPLGED SVGLKPLKNA SDGALMDDNQ
1800
1801
NEWGDEDLET KKFRFEEPVV LPDLSDQTDH RQWTQQHLDA ADLRMSAMAP
1850
1851
TPPQGEVDAD CMDVNVRGPD GFTPLMIASC SGGGLETGNS EEEEDAPAVI
1900
1901
SDFIYQGASL HNQTDRTGET ALHLAARYSR SDAAKRLLEA SADANIQDNM
1950
1951
GRTPLHAAVS ADAQGVFQIL LRNRATDLDA RMHDGTTPLI LAARLAVEGM
2000
2001
LEDLINSHAD VNAVDDLGKS ALHWAAAVNN VDAAVVLLKN GANKDMQNNK
2050
2051
EETPLFLAAR EGSYETAKVL LDHFANRDIT DHMDRLPRDI AQERMHHDIV
2100
2101
RLLDEYNLVR SPQLHGTALG GTPTLSPTLC SPNGYLGNLK SATQGKKARK
2150
2151
PSTKGLACGS KEAKDLKARR KKSQDGKGCL LDSSSMLSPV DSLESPHGYL
2200
2201
SDVASPPLLP SPFQQSPSMP LSHLPGMPDT HLGISHLNVA AKPEMAALAG
2250
2251
GSRLAFEPPP PRLSHLPVAS SASTVLSTNG TGAMNFTVGA PASLNGQCEW
2300
2301
LPRLQNGMVP SQYNPLRPGV TPGTLSTQAA GLQHSMMGPL HSSLSTNTLS
2350
2351
PIIYQGLPNT RLATQPHLVQ TQQVQPQNLQ LQPQNLQPPS QPHLSVSSAA
2400
2401
NGHLGRSFLS GEPSQADVQP LGPSSLPVHT ILPQESQALP TSLPSSMVPP
2450
2451
MTTTQFLTPP SQHSYSSSPV DNTPSHQLQV PEHPFLTPSP ESPDQWSSSS
2500
2501
PHSNISDWSE GISSPPTTMP SQITHIPEAF K                    
2531
 

Show the unformatted sequence.

Checksums:
CRC64:97C91F69BABF02BF
MD5:b6b30ae14b948774bd3e3d551d2328a3

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ank 2050 - 2082 1YMP A 183 - 215 Jmol AstexViewer SPICE
B 183 - 215 Jmol AstexViewer SPICE
2QC9 A 2050 - 2082 Jmol AstexViewer SPICE
B 2050 - 2082 Jmol AstexViewer SPICE
Ank_2 1910 - 1982 2QC9 B 1910 - 1982 Jmol AstexViewer SPICE
1914 - 1982 2QC9 A 1914 - 1982 Jmol AstexViewer SPICE
1936 - 1945 3P3N B 1936 - 1945 Jmol AstexViewer SPICE
1936 - 2015 2QC9 A 1936 - 2015 Jmol AstexViewer SPICE
B 1936 - 2015 Jmol AstexViewer SPICE
1966 - 2048 2QC9 A 1966 - 2048 Jmol AstexViewer SPICE
B 1966 - 2048 Jmol AstexViewer SPICE
1974 - 1982 1YMP A 107 - 115 Jmol AstexViewer SPICE
B 107 - 115 Jmol AstexViewer SPICE
1974 - 2015 1YMP A 107 - 148 Jmol AstexViewer SPICE
B 107 - 148 Jmol AstexViewer SPICE
1974 - 2048 1YMP A 107 - 181 Jmol AstexViewer SPICE
B 107 - 181 Jmol AstexViewer SPICE
2001 - 2013 3P3P B 199 - 211 Jmol AstexViewer SPICE
EGF_CA 452 - 489 2RQZ A 1 - 38 Jmol AstexViewer SPICE
2RR0 A 1 - 38 Jmol AstexViewer SPICE
2RR2 A 1 - 38 Jmol AstexViewer SPICE