Summary
This is the summary of UniProt entry HEMA_I89A7 (Q03909).
| Description: | Hemagglutinin |
| Source organism: |
Influenza A virus (strain A/Equine/Jillin/1/1989 H3N8)
(NCBI taxonomy ID
385585)
|
| Length: | 571 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| sig_p | n/a | 1 | 23 |
| Pfam A | Hemagglutinin | 34 | 571 |
| disorder | n/a | 230 | 231 |
| disorder | n/a | 236 | 239 |
| low_complexity | n/a | 351 | 360 |
| disorder | n/a | 382 | 390 |
| coiled_coil | n/a | 388 | 426 |
| transmembrane | n/a | 535 | 559 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q03909. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MLSLIMRTVI ALSYIFCLAF GQGLPWNDNN TATLCLGHHA VPNGTIVKTI
50 51
TDDQIEVTNA TELVQSSSTG KICNNPHRIL DGGNCTLIDA LLGDPHCNVF
100 101
QYETWDLFVE RTNAFSNCYP YDVPDYASLR SIVASSGTLE FFAESFTWTG
150 151
VTQNGGSSAC KRGTASSFFS RLNWLTKSGN AYPLLNVTMP NNDNFDKLYI
200 201
WGVHHPSTNQ EQTELYVQAS GRVTVSTRKS QQTVIPNIGS RPWVRGQSGR
250 251
VSIYWTIVKP GDVLVINSNG NLIAPRGYFK VRTGKSSIMR SDAPIDTCIS
300 301
ECITPNGSIP NDKPFQNVNK ITYGACPKYV KQNTLKLATG MRNVPEKQIR
350 351
GIFGAIAGFI ENGWEGMIDG WYGFRHQNSE GTGQAADLKS TQAALDQING
400 401
KLNRVIEKTN EKFHQIEKEF SEVEGRIQDL EKYVEDTKID LWSYNAELLV
450 451
ALENQHTIDL TDSEMNKLFE KTRRQLRENA EDMGNGCFKI YHNCDNACIE
500 501
SIRNGTYDHN IYRDEALNNR FQIKGVELKS GYKDWILWIS FAISCFLLCV
550 551
VLLGFIMWAC QKGNIRCNIC F
571
Show the unformatted sequence. |
| Checksums: |
CRC64:718DAA0F291CE349
MD5:e6029d077d3a7719d9fa565193ff3570
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Hemagglutinin | 327 - 339 | 2XN9 | F | 1 - 13 | Jmol AstexViewer SPICE |