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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: HEMA_I89A7 (Q03909)

Summary

This is the summary of UniProt entry HEMA_I89A7 (Q03909).

Description: Hemagglutinin
Source organism: Influenza A virus (strain A/Equine/Jillin/1/1989 H3N8) (NCBI taxonomy ID 385585)
Length: 571 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 23
Pfam A Hemagglutinin 34 571
disorder n/a 230 231
disorder n/a 236 239
low_complexity n/a 351 360
disorder n/a 382 390
coiled_coil n/a 388 426
transmembrane n/a 535 559

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q03909. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MLSLIMRTVI ALSYIFCLAF GQGLPWNDNN TATLCLGHHA VPNGTIVKTI
50
51
TDDQIEVTNA TELVQSSSTG KICNNPHRIL DGGNCTLIDA LLGDPHCNVF
100
101
QYETWDLFVE RTNAFSNCYP YDVPDYASLR SIVASSGTLE FFAESFTWTG
150
151
VTQNGGSSAC KRGTASSFFS RLNWLTKSGN AYPLLNVTMP NNDNFDKLYI
200
201
WGVHHPSTNQ EQTELYVQAS GRVTVSTRKS QQTVIPNIGS RPWVRGQSGR
250
251
VSIYWTIVKP GDVLVINSNG NLIAPRGYFK VRTGKSSIMR SDAPIDTCIS
300
301
ECITPNGSIP NDKPFQNVNK ITYGACPKYV KQNTLKLATG MRNVPEKQIR
350
351
GIFGAIAGFI ENGWEGMIDG WYGFRHQNSE GTGQAADLKS TQAALDQING
400
401
KLNRVIEKTN EKFHQIEKEF SEVEGRIQDL EKYVEDTKID LWSYNAELLV
450
451
ALENQHTIDL TDSEMNKLFE KTRRQLRENA EDMGNGCFKI YHNCDNACIE
500
501
SIRNGTYDHN IYRDEALNNR FQIKGVELKS GYKDWILWIS FAISCFLLCV
550
551
VLLGFIMWAC QKGNIRCNIC F                               
571
 

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Checksums:
CRC64:718DAA0F291CE349
MD5:e6029d077d3a7719d9fa565193ff3570

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Hemagglutinin 327 - 339 2XN9 F 1 - 13 Jmol AstexViewer SPICE