Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q11YM9_CYTH3 (Q11YM9)

Summary

This is the summary of UniProt entry Q11YM9_CYTH3 (Q11YM9).

Description: Sigma factor sigB regulation protein
Source organism: Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) (NCBI taxonomy ID 269798)
View Pfam proteome data.
Length: 683 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
transmembrane n/a 9 31
transmembrane n/a 43 63
low_complexity n/a 47 60
transmembrane n/a 75 94
transmembrane n/a 114 134
transmembrane n/a 146 168
transmembrane n/a 174 193
transmembrane n/a 205 222
low_complexity n/a 207 220
transmembrane n/a 242 266
Pfam A GAF_2 293 425
Pfam A SpoIIE 487 683
low_complexity n/a 582 593

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q11YM9. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNLKNLRNIY FLLAFVSWVL ILADDITVIR LAQPIIPSYF SDILVNTFLS
50
51
TFFLFTFLGF KIEIGLKRSG NFNDLLWQVF IIGAITVLIS LIIKSIGIFS
100
101
NNDFFIYDPL VSNILYHINI GIITIFLANG YYVWKKMILY QKTKRTDVIW
150
151
HIFEYLTLIS IVSNFFFFDI TDPYFLIFTS PITILGLICA FNLKWVAFLT
200
201
YKQKWRSILL LSLIIIISLS FLERVYAHHI ISNLLIDLAE NVFIQAIFGF
250
251
MLMNCIVALL VLLFNLPTSS VFEQKFGEVM LFQKLHQSLQ VGEKEEDMYE
300
301
LLISSSMTTV MADAAWLEIR DNKGGLKAFQ NSNIDEYDVF EIKKALRKNQ
350
351
VNISSEPQYI KDILSYPHTE KIKHLDYKSF LLIPLTSNNQ LIGTLVLLKN
400
401
LNDGFDKEMV DIIFTFVSQA SISIKNFRLM SDAIQTERYQ EELKIAKDVQ
450
451
QSLLPASLYL NNAVQLSVYS KGAKEVGGDY YDVYELSPTR FAIVIGDVSG
500
501
HGTSAAFNMA QMKGVFQSLV SLDLPVDEFM VLANNALGRC LERKSFITLS
550
551
LFVLNTETQS IQYARAGHCP AILIDSKNNE ALFLDGKGLG LGLSRNNTYE
600
601
KHINKYELSY SSNDVLILYT DGLVEAHNLA RDEYGYERLK QMGLESSADK
650
651
PRQIIDTIIE NVQHFSGSTQ FEDDCTLLVM KFS                  
683
 

Show the unformatted sequence.

Checksums:
CRC64:D4DB84E61EC0672C
MD5:098eb9e44d4cccbc4ac0e79913e07b89