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0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: YL11B_YEAST (Q12088)

Summary

This is the summary of UniProt entry YL11B_YEAST (Q12088).

Description: Transposon Ty1-LR1 Gag-Pol polyprotein EC=3.4.23.- EC=2.7.7.49 EC=2.7.7.7 EC=3.1.26.4
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 1755 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 94
Pfam A TYA 17 114
low_complexity n/a 67 81
disorder n/a 96 98
disorder n/a 102 103
disorder n/a 115 118
disorder n/a 120 121
disorder n/a 123 173
low_complexity n/a 153 165
Pfam B Pfam-B_2595 160 292
disorder n/a 203 205
disorder n/a 350 459
low_complexity n/a 402 418
disorder n/a 470 475
low_complexity n/a 471 480
disorder n/a 479 484
disorder n/a 486 487
Pfam A rve 660 782
disorder n/a 844 849
disorder n/a 852 857
disorder n/a 926 928
disorder n/a 930 1205
low_complexity n/a 960 969
low_complexity n/a 1130 1144
disorder n/a 1207 1209
Pfam A RVT_2 1265 1500
disorder n/a 1301 1302
disorder n/a 1313 1315
low_complexity n/a 1518 1528
low_complexity n/a 1686 1695

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q12088. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MESQQLSNYP HISHGSACAS VTSKEVHTNQ DPLDVSASKI QEYDKASTKA
50
51
NSQQTTTPAS SAVPENPHHA SPQPASVPPP QNGPYPQQCM MTQNQANPSG
100
101
WSFYGHPSMI PYTPYQMSPM YFPPGPQSQF PQYPSSVGTP LSTPSPESGN
150
151
TFTDSSSADS DMTSTKKYVR PPPMLTSPND FPNWVKTYIK FLQNSNLGGI
200
201
IPTVNGKPVR QITDDELTFL YNTFQIFAPS QFLPTWVKDI LSVDYTDIMK
250
251
ILSKSIEKMQ SDTQEANDIV TLANLQYNGS TPADAFETKV TNIIDRLNNN
300
301
GIHINNKVAC QLIMRGLSGE YKFLRYTRHR HLNMTVAELF LDIHAIYEEQ
350
351
QGSRNSKPNY RRNPSDEKND SRSYTNTTKP KVIARNPQKT NNSKSKTARA
400
401
HNVSTSNNSP STDNDSISKS TTEPIQLNNK HDLHLGQKLT ESTVNHTNHS
450
451
DDELPGHLLL DSGASRTLIR SAHHIHSASS NPDINVVDAQ KRNIPINAIG
500
501
DLQFHFQDNT KTSIKVLHTP NIAYDLLSLN ELAAVDITAC FTKNVLERSD
550
551
GTVLAPIVKY GDFYWVSKKY LLPSNISVPT INNVHTSEST RKYPYPFIHR
600
601
MLAHANAQTI RYSLKNNTIT YFNESDVDWS SAIDYQCPDC LIGKSTKHRH
650
651
IKGSRLKYQN SYEPFQYLHT DIFGPVHNLP KSAPSYFISF TDETTKFRWV
700
701
YPLHDRREDS ILDVFTTILA FIKNQFQASV LVIQMDRGSE YTNRTLHKFL
750
751
EKNGITPCYT TTADSRAHGV AERLNRTLLD DCRTQLQCSG LPNHLWFSAI
800
801
EFSTIVRNSL ASPKSKKSAR QHAGLAGLDI STLLPFGQPV IVNDHNPNSK
850
851
IHPRGIPGYA LHPSRNSYGY IIYLPSLKKT VDTTNYVILQ GKESRLDQFN
900
901
YDALTFDEDL NRLTASYQSF IASNEIQQSD DLNIESDHDF QSDIELHPEQ
950
951
PRNVLSKAVS PTDSTPPSTH TEDSKRVSKT NIRAPREVDP NISESNILPS
1000
1001
KKRSSTPQIS DIESTGSGGM HRLDVPLLAP MSQSNTHESS HASKSKDFRH
1050
1051
SDSYSDNETN HTNVPISSTG GTNNKTVPQT SEQETEKRII HRSPSIDTSS
1100
1101
SESNSLHHVV PIKTSDTCPK ENTEESIIAD LPLPDLPPEP PTELSDSFKE
1150
1151
LPPINSHQTN SSLGGIGDSN AYTTINSKKR SLEDNETEIK VSRDTWNTKN
1200
1201
MRSLEPPRSK KRIHLIAAVK AVKSIKPIRT TLRYDEAITY NKDIKEKEKY
1250
1251
IQAYHKEVNQ LLKMKTWDTD RYYDRKEIDP KRVINSMFIF NRKRGGTHKA
1300
1301
RFVARGDIQH PDTYDPGMQS NTVHHYALMT SLSLASDNNY YITQLDISSA
1350
1351
YLYADIKEEL YIRPPPHLGM NDKLIRLKKS LYGLKQSGAN WYETIKSYLI
1400
1401
KQCGMEEVRG WSCVFKNSQV TICLFVDDMI LFSKDLNANK KIITTLKKQY
1450
1451
DTKIINLGES DNEIQYDILG LEIKYQRGKY MKLGMENSLT EKIPKLNVPL
1500
1501
NPKGRKLSAP GQPGLYIDQQ ELELEEDDYK MKVHEMQKLI GLASYVGYKF
1550
1551
RFDLLYYINT LAQHILFPSK QVLDMTYELI QFIWNTRDKQ LIWHKSKPVK
1600
1601
PTNKLVVISD ASYGNQPYYK SQIGNIYLLN GKVIGGKSTK ASLTCTSTTE
1650
1651
AEIHAISESV PLLNNLSHLV QELNKKPITK GLLTDSKSTI SIIISNNEEK
1700
1701
FRNRFFGTKA MRLRDEVSGN HLHVCYIETK KNIADVMTKP LPIKTFKLLT
1750
1751
NKWIH                                                 
1755
 

Show the unformatted sequence.

Checksums:
CRC64:94EF1F6BFBED8AB3
MD5:c005e04c1b33aacc7f78493b68556bcb