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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: RL4_CANFA (Q28346)

Summary

This is the summary of UniProt entry RL4_CANFA (Q28346).

Description: 60S ribosomal protein L4
Source organism: Canis familiaris (Dog) (Canis lupus familiaris) (NCBI taxonomy ID 9615)
View Pfam proteome data.
Length: 421 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L4 22 263
disorder n/a 22 24
disorder n/a 50 56
disorder n/a 69 70
disorder n/a 75 80
disorder n/a 83 84
disorder n/a 87 90
disorder n/a 107 110
low_complexity n/a 123 136
low_complexity n/a 145 155
low_complexity n/a 162 175
disorder n/a 194 198
Pfam A Ribos_L4_asso_C 275 353
disorder n/a 288 290
disorder n/a 295 316
disorder n/a 325 328
disorder n/a 335 421
coiled_coil n/a 341 364
low_complexity n/a 353 421

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q28346. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MACARPLISV YSEKGESSGK NVTLPAVFKA PIRPDIVNFV HTNLRKNNRQ
50
51
PYAVSELAGH QTSAESWGTG RAVARIPRVR GGGTHRSGQG AFGNMCRGGR
100
101
MFAPTKTWRR WHRRVNTTQK RYAICSALAC LSLPALVMSK GHRIEEVPEL
150
151
PLVVEDKVEG YKKTKEAVLL LKKLKAWNDI KKVYASQRMR AGKGKMRNRR
200
201
RIQRRGPCII YNEDNGIIKA FRKHPGITLL NVSKLNILKL APGGHVGRFC
250
251
IWTESAFRKL DDLYGTWRKA ASLKSNYNLP MHKMLNTDLS RILKMPRDPR
300
301
ALRAPRKKIH RRVLKKNPLK NLRIMLKLNP YAKTMRRNTI LRQAKNHKLR
350
351
MDKAAAALEA KSEEKGVPGK KPRRKKGKKT VGVKKPKKPV VGKKAAATKK
400
401
PAADKKPAEK KPTTEEKKPA A                               
421
 

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Checksums:
CRC64:AF08C4DDA50A435B
MD5:45b0a887e15d2bfc64487ac6a0761f7e

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L4 22 - 263 2ZKR c 21 - 262 Jmol AstexViewer SPICE