Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q2N4T5_HELPX (Q2N4T5)

Summary

This is the summary of UniProt entry Q2N4T5_HELPX (Q2N4T5).

Description: D-alanine--D-alanine ligase EC=6.3.2.4
Source organism: Helicobacter pylori (Campylobacter pylori) (NCBI taxonomy ID 210)
Length: 347 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Dala_Dala_lig_N 1 119
Pfam A Dala_Dala_lig_C 136 318

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q2N4T5. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MEFCVLFGGA SFEHEISIVS AIALKGVLKD RIKYFIFLDE NHHFYLIEES
50
51
NMHSKYFAQI KEKKLPPLIL THNGLLKNSF LGAKIIELPL VINLVHGGDG
100
101
EDGKLASLLE FYRIAFIGPR IEASVLSYNK YLTKLYAKDL GIKTLDYVLL
150
151
NEKNRANALD LMNFNFPFIV KPSNAGSSLG VNVVKEEKEL IYALDSAFEY
200
201
SKEVLIEPFI QGVKEYNLAG CKIKKDFCFS YIEEPNKQEF LDFKQKYLDF
250
251
SRNKAPKASL SNALEEQLKE NFKKLYSDLF DGAIIRCDFF VIENEVYLNE
300
301
INPIPGSLAN YLFDDFKTTL ENLAQSLPKT PKIQIKNSYL LQIQKNK   
347
 

Show the unformatted sequence.

Checksums:
CRC64:76FF9FF841429903
MD5:079527976cf7e3e35b93dcc24a44adc7

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Dala_Dala_lig_C 136 - 318 2PVP A 136 - 318 Jmol AstexViewer SPICE
B 136 - 318 Jmol AstexViewer SPICE
Dala_Dala_lig_N 1 - 119 2PVP A 1 - 119 Jmol AstexViewer SPICE
B 1 - 119 Jmol AstexViewer SPICE