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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q2QNF3_ORYSJ (Q2QNF3)

Summary

This is the summary of UniProt entry Q2QNF3_ORYSJ (Q2QNF3).

Description: Os12g0567700 protein
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 261 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L2 11 90
disorder n/a 12 20
disorder n/a 27 28
Pfam A Ribosomal_L2_C 96 231
disorder n/a 144 152
disorder n/a 173 174
disorder n/a 180 183
disorder n/a 200 261
low_complexity n/a 239 260

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q2QNF3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MGRVIRAQRK GAGSVFKSHT HHRKGPARFR SLDFGERNGY LKGVVTDIIH
50
51
DPGRGAPLAK VTFRHPFRYK HQKELFVAAE GMYTGQFVYC GRRATLSIGN
100
101
VLPIRSVPEG AVVCNVEHHV GDRGVFARAS GDYAIVISHN PDNGTSRIKL
150
151
PSGAKKIVPS SCRAMIGQVA GGGRTEKPML KAGNAYHKYR VKRNCWPKVR
200
201
GVAMNPVEHP HGGGNHQHIG HASTVRRDAP PGQKVGLIAA RRTGRLRGQA
250
251
AATAAKADKA T                                          
261
 

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Checksums:
CRC64:A065F1E097960AA8
MD5:13c3e4373f04b4c7507891013398f0c4

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L2 11 - 90 3IZR B 11 - 90 Jmol AstexViewer SPICE
Ribosomal_L2_C 96 - 231 3IZR B 96 - 231 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.