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5  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RS25A_YEAST (Q3E792)

Summary

This is the summary of UniProt entry RS25A_YEAST (Q3E792).

Description: 40S ribosomal protein S25-A
Source organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (NCBI taxonomy ID 559292)
View Pfam proteome data.
Length: 108 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_S25 1 105
disorder n/a 1 5
low_complexity n/a 4 31
disorder n/a 11 13
disorder n/a 24 30

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q3E792. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPPKQQLSKA AKAAAALAGG KKSKKKWSKK SMKDRAQHAV ILDQEKYDRI
50
51
LKEVPTYRYV SVSVLVDRLK IGGSLARIAL RHLEKEGIIK PISKHSKQAI
100
101
YTRATASE                                              
108
 

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Checksums:
CRC64:C52D0328DEA125B5
MD5:9db1f09d860e4597977c95ab9586c433

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_S25 24 - 105 3IZB V 24 - 105 Jmol AstexViewer SPICE
36 - 102 3O2Z Q 36 - 102 Jmol AstexViewer SPICE
36 - 105 3U5C Z 36 - 105 Jmol AstexViewer SPICE
37 - 105 3U5G Z 37 - 105 Jmol AstexViewer SPICE
40 - 102 3O30 Q 40 - 102 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.