Summary
This is the summary of UniProt entry Q3J5A7_RHOS4 (Q3J5A7).
| Description: | Cytochrome c oxidase, aa3 type, subunit I |
| Source organism: |
Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
(NCBI taxonomy ID
272943)
View Pfam proteome data. |
| Length: | 566 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| Pfam A | COX1 | 26 | 504 |
| transmembrane | n/a | 29 | 51 |
| transmembrane | n/a | 104 | 123 |
| transmembrane | n/a | 143 | 162 |
| transmembrane | n/a | 189 | 215 |
| transmembrane | n/a | 227 | 254 |
| transmembrane | n/a | 287 | 306 |
| transmembrane | n/a | 313 | 334 |
| transmembrane | n/a | 346 | 369 |
| transmembrane | n/a | 381 | 400 |
| transmembrane | n/a | 420 | 440 |
| transmembrane | n/a | 452 | 473 |
| transmembrane | n/a | 493 | 519 |
| low_complexity | n/a | 495 | 514 |
| disorder | n/a | 553 | 556 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q3J5A7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MADAAIHGHE HDRRGFFTRW FMSTNHKDIG VLYLFTGGLV GLISVAFTVY
50 51
MRMELMAPGV QFMCAEHLES GLVKGFFQSL WPSAVENCTP NGHLWNVMIT
100 101
GHGILMMFFV VIPALFGGFG NYFMPLHIGA PDMAFPRMNN LSYWLYVAGT
150 151
SLAVASLFAP GGNGQLGSGI GWVLYPPLST SESGYSTDLA IFAVHLSGAS
200 201
SILGAINMIT TFLNMRAPGM TMHKVPLFAW SIFVTAWLIL LALPVLAGAI
250 251
TMLLTDRNFG TTFFQPSGGG DPVLYQHILW FFGHPEVYII VLPAFGIVSH
300 301
VIATFAKKPI FGYLPMVYAM VAIGVLGFVV WAHHMYTAGL SLTQQSYFMM
350 351
ATMVIAVPTG IKIFSWIATM WGGSIELKTP MLWALGFLFL FTVGGVTGIV
400 401
LSQASVDRYY HDTYYVVAHF HYVMSLGAVF GIFAGIYFWI GKMSGRQYPE
450 451
WAGKLHFWMM FVGANLTFFP QHFLGRQGMP RRYIDYPEAF ATWNFVSSLG
500 501
AFLSFASFLF FLGVIFYTLT RGARVTANNY WNEHADTLEW TLTSPPPEHT
550 551
FEQLPKREDW ERAPAH
566
Show the unformatted sequence. |
| Checksums: |
CRC64:65A74DBCC5C550B0
MD5:99b214973139b7d8229b1bc9a72dd480
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| COX1 | 26 - 504 | 3OM3 | A | 26 - 504 | Jmol AstexViewer SPICE |
| C | 26 - 504 | Jmol AstexViewer SPICE | |||
| 3OMA | A | 26 - 504 | Jmol AstexViewer SPICE | ||
| C | 26 - 504 | Jmol AstexViewer SPICE | |||
| 3OMI | A | 26 - 504 | Jmol AstexViewer SPICE | ||
| C | 26 - 504 | Jmol AstexViewer SPICE | |||
| 3OMN | A | 26 - 504 | Jmol AstexViewer SPICE | ||
| C | 26 - 504 | Jmol AstexViewer SPICE |