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5  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q41038_PEA (Q41038)

Summary

This is the summary of UniProt entry Q41038_PEA (Q41038).

Description: Type II chlorophyll a/b binding protein from photosystem I
Source organism: Pisum sativum (Garden pea) (NCBI taxonomy ID 3888)
Length: 269 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam B Pfam-B_85947 1 30
sig_p n/a 1 20
low_complexity n/a 2 20
disorder n/a 16 28
disorder n/a 51 54
Pfam A Chloroa_b-bind 73 240

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q41038. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MASACASSAI AAVAISTPSS QKNGSPSGTS KAFLGRKLKV NSSTASPSRV
50
51
RSTSTVCTVA EPDRPLWFPG STPPPWLDGS LPGDFGFDPL GLGSDPESLR
100
101
WNVQAELVHS RWAMLGAAGI FIPEFLTKLG ILNTPSWYTA GEQEYFTDTT
150
151
TLFIVELVFI GWAEGRRWAD ILNPGCVNTD PIFPNNKLTG TDVGYPGGLW
200
201
FDPLGWGSAS PQKLKELRTK EIKNGRLAML AVMGAWFQHI YTGTGPIDNL
250
251
FAHLADPGHA TIFAAFTPK                                  
269
 

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Checksums:
CRC64:DC007AD3C780AD06
MD5:d81ea90670a0d308e061738a85ae2ca2

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Chloroa_b-bind 76 - 240 2O01 2 18 - 182 Jmol AstexViewer SPICE
94 - 240 2WSC 2 36 - 182 Jmol AstexViewer SPICE
2WSE 2 36 - 182 Jmol AstexViewer SPICE
2WSF 2 36 - 182 Jmol AstexViewer SPICE
3LW5 2 94 - 240 Jmol AstexViewer SPICE