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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q48898_MYCAT (Q48898)

Summary

This is the summary of UniProt entry Q48898_MYCAT (Q48898).

Description: Superantigen
Source organism: Mycoplasma arthritidis (NCBI taxonomy ID 2111)
Length: 238 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 26
Pfam A MA-Mit 25 238
coiled_coil n/a 122 142

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q48898. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKTKKLLIAT VTLATGLLGI LPLTSMKLRV ENPKKAQKHF VQNLNNVVFT
50
51
NKELEDIYNL SNKEETKEVL KLFKLKVNQF YRHAFGIVND YNGLLEYKEI
100
101
FNMMFLKLSV VFDTQRKEAN NVEQIKRNIA ILDEIMAKAD NDLSYFISQN
150
151
KNFQELWDKA VKLTKEMKIK LKGQKLDLRD GEVAINKVRE LFGSDKNVKE
200
201
LWWFRSLLVK GVYLIKRYYE GDIELKTTSD FAKAVFED             
238
 

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Checksums:
CRC64:2A005A6263385243
MD5:6f9333f0dd42891f0da0d7aefb8b1299

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
MA-Mit 26 - 238 1R5I D 1 - 213 Jmol AstexViewer SPICE
H 1 - 213 Jmol AstexViewer SPICE
2ICW G 1 - 213 Jmol AstexViewer SPICE
H 1 - 213 Jmol AstexViewer SPICE
2OJE D 1 - 213 Jmol AstexViewer SPICE
H 1 - 213 Jmol AstexViewer SPICE
42 - 237 3KPH A 17 - 212 Jmol AstexViewer SPICE
44 - 237 3KPH B 19 - 212 Jmol AstexViewer SPICE