Summary
This is the summary of UniProt entry NANB_STRPN (Q54727).
| Description: | Sialidase B EC=3.2.1.18 |
| Source organism: |
Streptococcus pneumoniae
(NCBI taxonomy ID
1313)
View Pfam proteome data. |
| Length: | 697 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| sig_p | n/a | 1 | 29 |
| Pfam A | Sialidase | 42 | 228 |
| low_complexity | n/a | 50 | 66 |
| disorder | n/a | 276 | 277 |
| Pfam A | BNR | 280 | 291 |
| disorder | n/a | 356 | 357 |
| disorder | n/a | 394 | 396 |
| disorder | n/a | 403 | 405 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q54727. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MNKRGLYSKL GISVVGISLL MGVPTLIHAN ELNYGQLSIS PIFQGGSYQL
50 51
NNKSIDISSL LLDKLSGESQ TVVMKFKADK PNSLQALFGL SNSKAGFKNN
100 101
YFSIFMRDSG EIGVEIRDAQ KGINYLFSRP ASLWGKHKGQ AVENTLVFVS
150 151
DSKDKTYTMY VNGIEVFSET VDTFLPISNI NGIDKATLGA VNREGKEHYL
200 201
AKGSIDEISL FNKAISDQEV STIPLSNPFQ LIFQSGDSTQ ANYFRIPTLY
250 251
TLSSGRVLSS IDARYGGTHD SKSKINIATS YSDDNGKTWS EPIFAMKFND
300 301
YEEQLVYWPR DNKLKNSQIS GSASFIDSSI VEDKKSGKTI LLADVMPAGI
350 351
GNNNANKADS GFKEINGHYY LKLKKNGDND FRYTVRENGV VYNETTNKPT
400 401
NYTINDKYEV LEGGKSLTVE QYSVDFDSGS LRERHNGKQV PMNVFYKDSL
450 451
FKVTPTNYIA MTTSQNRGES WEQFKLLPPF LGEKHNGTYL CPGQGLALKS
500 501
SNRLIFATYT SGELTYLISD DSGQTWKKSS ASIPFKNATA EAQMVELRDG
550 551
VIRTFFRTTT GKIAYMTSRD SGETWSKVSY IDGIQQTSYG TQVSAIKYSQ
600 601
LIDGKEAVIL STPNSRSGRK GGQLVVGLVN KEDDSIDWKY HYDIDLPSYG
650 651
YAYSAITELP NHHIGVLFEK YDSWSRNELH LSNVVQYIDL EINDLTK
697
Show the unformatted sequence. |
| Checksums: |
CRC64:A0D9F9AFDE46AFD7
MD5:f38b14c33ebcbde4ac557aaabac7dac3
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| BNR | 280 - 291 | 2JKB | A | 280 - 291 | Jmol AstexViewer SPICE |
| 2VW0 | A | 280 - 291 | Jmol AstexViewer SPICE | ||
| 2VW1 | A | 280 - 291 | Jmol AstexViewer SPICE | ||
| 2VW2 | A | 280 - 291 | Jmol AstexViewer SPICE | ||
| Sialidase | 42 - 228 | 2JKB | A | 42 - 228 | Jmol AstexViewer SPICE |
| 2VW0 | A | 42 - 228 | Jmol AstexViewer SPICE | ||
| 2VW1 | A | 42 - 228 | Jmol AstexViewer SPICE | ||
| 2VW2 | A | 42 - 228 | Jmol AstexViewer SPICE |