Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: Q59310_CLOPF (Q59310)

Summary

This is the summary of UniProt entry Q59310_CLOPF (Q59310).

Description: Exo-alpha-sialidase EC=3.2.1.18
Source organism: Clostridium perfringens (NCBI taxonomy ID 1502)
Length: 694 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 24
disorder n/a 35 36
Pfam A Sialidase 48 236
disorder n/a 122 135
disorder n/a 240 242
disorder n/a 291 305
disorder n/a 312 314
Pfam A BNR 434 445
disorder n/a 509 513
disorder n/a 515 516
disorder n/a 518 525
disorder n/a 536 538
Pfam B Pfam-B_506875 537 574

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q59310. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MNYKGITLIL TAAMVISGGN YVLVKGSTLD SGKNNSGYEI KVNNSENLSS
50
51
LGEYKDINLE SSNASNITYD LEKYKNLDEG TIVVRFNSKD SKIQSLLGIS
100
101
NSKTKNGYFN FYVTNSRVGF ELRNQKNEGN TQSGTENLVH MYKDVALNDG
150
151
DNTVALKIEK NKGYKLFLNG KIIKEVKDTN TKFLNNIENL DSAFIGKTNR
200
201
YGQSNEYNFK GNIGFMNIYN EPLGDDYLLS KTGETKAKEE VLVEGAVKTE
250
251
PVDLFHPGFL NSSNYRIPAL FKTKEGTLIA SIDARRHGGA DAPNNDIDTA
300
301
VRRSEDGGKT WDEGQIIMDY PDKSSVIDTT LIQDDETGRI FLLVTHFPSK
350
351
YGFWNAGLGS GFKNIDGKEY LCLYDSSGKE FTVRENVVYD KDGNKTEYTT
400
401
NALGDLFKNG TKIDNINSST APLKAKGTSY INLVYSDDDG KTWSEPQNIN
450
451
FQVKKDWMKF LGIAPGRGIQ IKNGEHKGRI VVPVYYTNEK GKQSSAVIYS
500
501
DDSGKNWTIG ESPNDNRKLE NGKIINSKTL SDDAPQLTEC QVVEMPNGQL
550
551
KLFMRNLSGY LNIATSFDGG ATWDETVEKD TNVLEPYCQL SVINYSQKVD
600
601
GKDAVIFSNP NARSRSNGTV RIGLINQVGT YENGEPKYEF DWKYNKLVKP
650
651
GYYAYSCLTE LSNGNIGLLY EGTPSEEMSY IEMNLKYLES GANK      
694
 

Show the unformatted sequence.

Checksums:
CRC64:22D23E25A0A8DC72
MD5:dde0eb099f50ebfaa0ca1b9491605efa

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
BNR 434 - 445 2BF6 A 434 - 445 Jmol AstexViewer SPICE
2VK5 A 1434 - 1445 Jmol AstexViewer SPICE
2VK6 A 1434 - 1445 Jmol AstexViewer SPICE
2VK7 A 1434 - 1445 Jmol AstexViewer SPICE
B 1434 - 1445 Jmol AstexViewer SPICE