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4  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: DDL_STAAC (Q5HEB7)

Summary

This is the summary of UniProt entry DDL_STAAC (Q5HEB7).

Description: D-alanine--D-alanine ligase EC=6.3.2.4
Source organism: Staphylococcus aureus (strain COL) (NCBI taxonomy ID 93062)
View Pfam proteome data.
Length: 356 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Dala_Dala_lig_N 4 119
disorder n/a 53 55
disorder n/a 60 61
Pfam A Dala_Dala_lig_C 136 339
coiled_coil n/a 148 168
disorder n/a 351 355

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5HEB7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MTKENICIVF GGKSAEHEVS ILTAQNVLNA IDKDKYHVDI IYITNDGDWR
50
51
KQNNITAEIK STDELHLENG EALEISQLLK ESSSGQPYDA VFPLLHGPNG
100
101
EDGTIQGLFE VLDVPYVGNG VLSAASSMDK LVMKQLFEHR GLPQLPYISF
150
151
LRSEYEKYEH NILKLVNDKL NYPVFVKPAN LGSSVGISKC NNEAELKEGI
200
201
KEAFQFDRKL VIEQGVNARE IEVAVLGNDY PEATWPGEVV KDVAFYDYKS
250
251
KYKDGKVQLQ IPADLDEDVQ LTLRNMALEA FKATDCSGLV RADFFVTEDN
300
301
QIYINETNAM PGFTAFSMYP KLWENMGLSY PELITKLIEL AKERHQDKQK
350
351
NKYKID                                                
356
 

Show the unformatted sequence.

Checksums:
CRC64:65822883958DC645
MD5:baf3903de1e523b86c3394d9a7ea9029

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Dala_Dala_lig_C 136 - 339 2I80 A 136 - 339 Jmol AstexViewer SPICE
B 136 - 339 Jmol AstexViewer SPICE
2I87 A 136 - 339 Jmol AstexViewer SPICE
B 136 - 339 Jmol AstexViewer SPICE
2I8C A 136 - 339 Jmol AstexViewer SPICE
B 136 - 339 Jmol AstexViewer SPICE
3N8D A 136 - 339 Jmol AstexViewer SPICE
B 136 - 339 Jmol AstexViewer SPICE
Dala_Dala_lig_N 4 - 119 2I80 A 4 - 119 Jmol AstexViewer SPICE
B 4 - 119 Jmol AstexViewer SPICE
2I87 A 4 - 119 Jmol AstexViewer SPICE
B 4 - 119 Jmol AstexViewer SPICE
2I8C A 4 - 119 Jmol AstexViewer SPICE
B 4 - 119 Jmol AstexViewer SPICE
3N8D A 4 - 119 Jmol AstexViewer SPICE
B 4 - 119 Jmol AstexViewer SPICE