Summary

This is the summary of UniProt entry PKND_CHLAB (Q5L5J7).

Description:

Serine/threonine-protein kinase pknD EC=2.7.11.1

Source organism:

Chlamydophila abortus (strain S26/3) (NCBI taxonomy ID 218497)
View Pfam proteome data.

Length:

933 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source	Domain	Start	End	Gathering threshold (bits)		Score (bits)		E-value
Source	Domain	Start	End	Sequence	Domain	Sequence	Domain	Sequence	Domain
Pfam A	Pkinase	4	287	20.40	20.40	158.20	157.60	3.2e-43	4.9e-43
disorder	n/a	202	203	n/a	n/a	n/a	n/a	n/a	n/a
coiled_coil	n/a	565	585	n/a	n/a	n/a	n/a	n/a	n/a

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

We generate the topmost image from data in the Pfam database, but subsequent images are constructed on-the-fly using data retrieved from other sources using the Distributed Annotation System (DAS). DAS is a system for sharing sequence annotations in a standard format and we use it to find features and sequence information from a wide variety of other sources, from UniProt to InterPro to Superfamily.

Each DAS source is represented in a new track, although some sources may generate more than one track, if they have features which overlap. Each feature that we find is shown as a simple box, positioned according to its residue position on the sequence.

Moving your mouse over a feature in the display will highlight the feature and show a tooltip giving details of the feature. If the DAS source supplied a URL, you can also click on the feature to visit that URL. In some browsers you will also see a thin, vertical cursor, which follows the mouse and shows the residue position within the sequence.

You can turn DAS sources on and off using the control panel under the sequence images. Check the boxes for the DAS sources that you want to see; uncheck those that you are not interested in. Press Update to query the new set of DAS sources and re-generate the image. Note that if you have lots of sources turned on, the time taken to generate the images will increase. You can see the homepage for each of the DAS sources by clicking on its name in the update panel. The "source" link next to each source points directly at the DAS source. Depending on how the source is configured, that link may return some usage information or simply an XML fragment with the response to the empty query that you just made.

Please note: this is an experimental feature and there are several known bugs and limitations. Please be patient as we improve the tool.

Note: it can take a few seconds for this image to be generated and loaded.

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5L5J7. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:

MQHYDIIRMI GKGGMGEVYL AYDPICSRKV ALKRIREDLS DNELLKKRFL

REAKIAADLV HPGVVPVFTI CSDSDLVYYT MPYIEGYTLK SLLKSVWQCD

100

101

SLPKDLAEQT SVGTFLSIFH KICSTIEYVH SRGILHRDLK PDNILLGLFS

150

151

EVVILDWGAA LSKEMKEDVL LDLDIPMPGS MFSNMTVPGK IVGTPDYMAP

200

201

ERLRGAPASE STDIYALGVI LYQMLTLSFP YRNKKGKKIH VPNHIISPEE

250

251

VAPHREIPSF LSQVVMRALA TDPKERYTSV QALKADIEQH LQGSPQWTPK

300

301

IALHTQDAEC WKFHESILLS KYFPMLEVSP ALWYSLAISK IESFSEVRLE

350

351

YTLLRKGLEG GFGILLPPSE NVDHGDFYRG YGFWLHIKKN VLSVSLVRNG

400

401

LEIQKTSGNI DVNQEKFFIA FEKQNHRLSL NIDHTVWMIH MDYLPGRGGR

450

451

IGVIIQDITD VCGNIVVLES SGALHVSCLA VPDAFLNEKL YDRAITFYRR

500

501

IVESFPGRKE GYEAQFRIGI AVLEKAAEEG DQEGFSQALR EFSVLHDSVA

550

551

APLEYLGKAL VYQRLEEYNE EVKSLLLALK RYGQRPEISR VRDHVVDRLH

600

601

EALYSNHRVS LVFMLLALHV APESINSSEE EHFLKNLQGK IHDTLFCSLD

650

651

ISPIDFRSSK MELLLSYWSG FTPFLPGLFQ RSWDLKDYRA LADIFYTAAD

700

701

LGEREFIDVY GNTLRENIQA TTFTEDIVEI FPHQLIHFLS ALDAIFLHAP

750

751

VEKIFSDVDI LDPVLIIYLF DLFAKDVLIH GKGEQILDAI QVLETYVSPQ

800

801

QRHTYLLPYE ILAYLWMKEG KKVHELLSAH YDESFWIEDS HWAFVLYGYW

850

851

LALTEESSLA YLHLSGCRED HVAPRALIGL FCSPLGICEN QWSYQERRNL

900

901

LLQKFIFFHC LGDDVERDNC RVAYDLLVKE RLL

933

Show the unformatted sequence.

Checksums:

CRC64:FF1C265A91BE1A29

MD5:a1e3c4fde18d2a3c867f70101b3b5e70

Protein: PKND_CHLAB (Q5L5J7)

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Summary

Pfam domains

Sequence annotations

Sequence information