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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q5N754_ORYSJ (Q5N754)

Summary

This is the summary of UniProt entry Q5N754_ORYSJ (Q5N754).

Description: cDNA clone:J033071P12, full insert sequence
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 162 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L24e 3 73
disorder n/a 62 81
disorder n/a 96 162
coiled_coil n/a 112 139
low_complexity n/a 116 138
low_complexity n/a 149 161

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5N754. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVLKTELCRF SGQKIYPGKG IRFIRADSQV FLFANSKCKR YFHNRLKPAK
50
51
LTWTAMYRKQ HKKDIHAEAV KKRRRTTKKP YSRSIVGATL EVIQKKRSEK
100
101
PEVRDAAREA ALREIKERIK KTKDEKKAKK AEVAKSQKTQ SKGGATQRGA
150
151
KGPKIGGGGG KR                                         
162
 

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Checksums:
CRC64:7D0F1E3FD9E8DBE9
MD5:da6b912840550c18ba38be44ba54303a

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L24e 3 - 73 3IZR Z 3 - 73 Jmol AstexViewer SPICE