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70  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL25_THET8 (Q5SHZ1)

Summary

This is the summary of UniProt entry RL25_THET8 (Q5SHZ1).

Description: 50S ribosomal protein L25
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (NCBI taxonomy ID 300852)
View Pfam proteome data.
Length: 206 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L25p 5 88
disorder n/a 72 74
Pfam A Ribosomal_TL5_C 94 181
disorder n/a 157 159
disorder n/a 175 177
low_complexity n/a 178 206
disorder n/a 183 187
disorder n/a 191 206

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5SHZ1. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MEYRLKAYYR EGEKPSALRR AGKLPGVMYN RHLNRKVYVD LVEFDKVFRQ
50
51
ASIHHVIVLE LPDGQSLPTL VRQVNLDKRR RRPEHVDFFV LSDEPVEMYV
100
101
PLRFVGTPAG VRAGGVLQEI HRDILVKVSP RNIPEFIEVD VSGLEIGDSL
150
151
HASDLKLPPG VELAVSPEET IAAVVPPEDV EKLAEEAAAE VAEPEVIKKG
200
201
KEEEEE                                                
206
 

Show the unformatted sequence.

Checksums:
CRC64:ACC20EC1279181CD
MD5:25905d6de9a8a8421d05b0896293d466

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L25p 5 - 88 2HGJ Y 5 - 88 Jmol AstexViewer SPICE
2HGQ Y 5 - 88 Jmol AstexViewer SPICE
2HGU Y 5 - 88 Jmol AstexViewer SPICE
2J01 Z 5 - 88 Jmol AstexViewer SPICE
2J03 Z 5 - 88 Jmol AstexViewer SPICE
2V47 Z 5 - 88 Jmol AstexViewer SPICE
2V49 Z 5 - 88 Jmol AstexViewer SPICE
2WDI Z 5 - 88 Jmol AstexViewer SPICE
2WDJ Z 5 - 88 Jmol AstexViewer SPICE
2WDL Z 5 - 88 Jmol AstexViewer SPICE
2WDN Z 5 - 88 Jmol AstexViewer SPICE
2WH2 Z 5 - 88 Jmol AstexViewer SPICE
2WH4 Z 5 - 88 Jmol AstexViewer SPICE
2WRJ Z 5 - 88 Jmol AstexViewer SPICE
2WRL Z 5 - 88 Jmol AstexViewer SPICE
2WRO Z 5 - 88 Jmol AstexViewer SPICE
2WRR Z 5 - 88 Jmol AstexViewer SPICE
2X9S Z 5 - 88 Jmol AstexViewer SPICE
2X9U Z 5 - 88 Jmol AstexViewer SPICE
2XG0 Z 5 - 88 Jmol AstexViewer SPICE
2XG2 Z 5 - 88 Jmol AstexViewer SPICE
2XQE Z 5 - 88 Jmol AstexViewer SPICE
2XUX Z 5 - 88 Jmol AstexViewer SPICE
2Y0V Z 5 - 88 Jmol AstexViewer SPICE
2Y0X Z 5 - 88 Jmol AstexViewer SPICE
2Y0Z Z 5 - 88 Jmol AstexViewer SPICE
2Y11 Z 5 - 88 Jmol AstexViewer SPICE
2Y13 Z 5 - 88 Jmol AstexViewer SPICE
2Y15 Z 5 - 88 Jmol AstexViewer SPICE
2Y17 Z 5 - 88 Jmol AstexViewer SPICE
2Y19 Z 5 - 88 Jmol AstexViewer SPICE
3FIN Z 5 - 88 Jmol AstexViewer SPICE
3HUX Z 4 - 87 Jmol AstexViewer SPICE
3HUZ Z 4 - 87 Jmol AstexViewer SPICE
3I8F V 5 - 88 Jmol AstexViewer SPICE
3I8I V 5 - 88 Jmol AstexViewer SPICE
3I9C V 5 - 88 Jmol AstexViewer SPICE
3I9E V 5 - 88 Jmol AstexViewer SPICE
3KIR Z 5 - 88 Jmol AstexViewer SPICE
3KIT Z 5 - 88 Jmol AstexViewer SPICE
3KIW Z 5 - 88 Jmol AstexViewer SPICE
3KIY Z 5 - 88 Jmol AstexViewer SPICE
3KNI Z 4 - 87 Jmol AstexViewer SPICE
3KNK Z 4 - 87 Jmol AstexViewer SPICE
3KNM Z 4 - 87 Jmol AstexViewer SPICE
3KNO Z 4 - 87 Jmol AstexViewer SPICE
3TVE V 5 - 88 Jmol AstexViewer SPICE
3TVH V 5 - 88 Jmol AstexViewer SPICE
3UXQ Z 5 - 88 Jmol AstexViewer SPICE
3UXR Z 5 - 88 Jmol AstexViewer SPICE
3UYE V 5 - 88 Jmol AstexViewer SPICE
3UYG V 5 - 88 Jmol AstexViewer SPICE
3UZ1 V 5 - 88 Jmol AstexViewer SPICE
3UZ2 V 5 - 88 Jmol AstexViewer SPICE
3UZ8 V 5 - 88 Jmol AstexViewer SPICE
3UZ9 V 5 - 88 Jmol AstexViewer SPICE
3UZF V 5 - 88 Jmol AstexViewer SPICE
3UZH V 5 - 88 Jmol AstexViewer SPICE
3UZK V 5 - 88 Jmol AstexViewer SPICE
3UZN V 5 - 88 Jmol AstexViewer SPICE
3V23 Z 5 - 88 Jmol AstexViewer SPICE
3V25 Z 5 - 88 Jmol AstexViewer SPICE
3V27 Z 5 - 88 Jmol AstexViewer SPICE
3V29 Z 5 - 88 Jmol AstexViewer SPICE
3V2D Z 5 - 88 Jmol AstexViewer SPICE
3V2F Z 5 - 88 Jmol AstexViewer SPICE
3ZVP Z 5 - 88 Jmol AstexViewer SPICE
4ABS Z 5 - 88 Jmol AstexViewer SPICE
4DHA Z 5 - 88 Jmol AstexViewer SPICE
4DHC Z 5 - 88 Jmol AstexViewer SPICE
Ribosomal_TL5_C 94 - 172 3I9E V 94 - 172 Jmol AstexViewer SPICE
94 - 175 3TVE V 94 - 175 Jmol AstexViewer SPICE
3UYE V 94 - 175 Jmol AstexViewer SPICE
3UZ1 V 94 - 175 Jmol AstexViewer SPICE
3UZ9 V 94 - 175 Jmol AstexViewer SPICE
3UZF V 94 - 175 Jmol AstexViewer SPICE
3UZK V 94 - 175 Jmol AstexViewer SPICE
94 - 176 3I9C V 94 - 176 Jmol AstexViewer SPICE
94 - 178 2WRO Z 94 - 178 Jmol AstexViewer SPICE
2WRR Z 94 - 178 Jmol AstexViewer SPICE
2XQE Z 94 - 178 Jmol AstexViewer SPICE
2Y0V Z 94 - 178 Jmol AstexViewer SPICE
2Y0X Z 94 - 178 Jmol AstexViewer SPICE
2Y11 Z 94 - 178 Jmol AstexViewer SPICE
2Y19 Z 94 - 178 Jmol AstexViewer SPICE
3ZVP Z 94 - 178 Jmol AstexViewer SPICE
94 - 179 2J01 Z 94 - 179 Jmol AstexViewer SPICE
2J03 Z 94 - 179 Jmol AstexViewer SPICE
2V47 Z 94 - 179 Jmol AstexViewer SPICE
2V49 Z 94 - 179 Jmol AstexViewer SPICE
2WDI Z 94 - 179 Jmol AstexViewer SPICE
2WDJ Z 94 - 179 Jmol AstexViewer SPICE
2WDL Z 94 - 179 Jmol AstexViewer SPICE
2WDN Z 94 - 179 Jmol AstexViewer SPICE
2WH2 Z 94 - 179 Jmol AstexViewer SPICE
2WH4 Z 94 - 179 Jmol AstexViewer SPICE
3FIN Z 94 - 179 Jmol AstexViewer SPICE
3HUZ Z 93 - 178 Jmol AstexViewer SPICE
3KNI Z 93 - 178 Jmol AstexViewer SPICE
3KNK Z 93 - 178 Jmol AstexViewer SPICE
3KNM Z 93 - 178 Jmol AstexViewer SPICE
3KNO Z 93 - 178 Jmol AstexViewer SPICE
3TVH V 94 - 179 Jmol AstexViewer SPICE
3UYG V 94 - 179 Jmol AstexViewer SPICE
3UZ2 V 94 - 179 Jmol AstexViewer SPICE
3UZ8 V 94 - 179 Jmol AstexViewer SPICE
3UZH V 94 - 179 Jmol AstexViewer SPICE
3UZN V 94 - 179 Jmol AstexViewer SPICE
94 - 180 2HGJ Y 94 - 180 Jmol AstexViewer SPICE
2HGQ Y 94 - 180 Jmol AstexViewer SPICE
2HGU Y 94 - 180 Jmol AstexViewer SPICE
94 - 181 2WRJ Z 94 - 181 Jmol AstexViewer SPICE
2WRL Z 94 - 181 Jmol AstexViewer SPICE
2X9S Z 94 - 181 Jmol AstexViewer SPICE
2X9U Z 94 - 181 Jmol AstexViewer SPICE
2XG0 Z 94 - 181 Jmol AstexViewer SPICE
2XG2 Z 94 - 181 Jmol AstexViewer SPICE
2XUX Z 94 - 181 Jmol AstexViewer SPICE
2Y0Z Z 94 - 181 Jmol AstexViewer SPICE
2Y13 Z 94 - 181 Jmol AstexViewer SPICE
2Y15 Z 94 - 181 Jmol AstexViewer SPICE
2Y17 Z 94 - 181 Jmol AstexViewer SPICE
3HUX Z 93 - 180 Jmol AstexViewer SPICE
3I8F V 94 - 181 Jmol AstexViewer SPICE
3I8I V 94 - 181 Jmol AstexViewer SPICE
3KIR Z 94 - 181 Jmol AstexViewer SPICE
3KIT Z 94 - 181 Jmol AstexViewer SPICE
3KIW Z 94 - 181 Jmol AstexViewer SPICE
3KIY Z 94 - 181 Jmol AstexViewer SPICE
3UXQ Z 94 - 181 Jmol AstexViewer SPICE
3UXR Z 94 - 181 Jmol AstexViewer SPICE
3V23 Z 94 - 181 Jmol AstexViewer SPICE
3V25 Z 94 - 181 Jmol AstexViewer SPICE
3V27 Z 94 - 181 Jmol AstexViewer SPICE
3V29 Z 94 - 181 Jmol AstexViewer SPICE
3V2D Z 94 - 181 Jmol AstexViewer SPICE
3V2F Z 94 - 181 Jmol AstexViewer SPICE
4ABS Z 94 - 181 Jmol AstexViewer SPICE
4DHA Z 94 - 181 Jmol AstexViewer SPICE
4DHC Z 94 - 181 Jmol AstexViewer SPICE