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10  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: RL11_THET8 (Q5SLP6)

Summary

This is the summary of UniProt entry RL11_THET8 (Q5SLP6).

Description: 50S ribosomal protein L11
Source organism: Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (NCBI taxonomy ID 300852)
View Pfam proteome data.
Length: 147 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
sig_p n/a 1 17
Pfam A Ribosomal_L11_N 7 65
disorder n/a 19 25
Pfam A Ribosomal_L11 70 138
disorder n/a 91 93

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5SLP6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKKVVAVVKL QLPAGKATPA PPVGPALGQH GANIMEFVKA FNAATANMGD
50
51
AIVPVEITIY ADRSFTFVTK TPPASYLIRK AAGLEKGAHK PGREKVGRIT
100
101
WEQVLEIAKQ KMPDLNTTDL EAAARMIAGS ARSMGVEVVG APEVKDA   
147
 

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Checksums:
CRC64:3D8DECEBE85B5FE9
MD5:e437b8e500617a83fc637efdc2fb66e8

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L11 70 - 138 2WH2 K 70 - 138 Jmol AstexViewer SPICE
2WH4 K 70 - 138 Jmol AstexViewer SPICE
2WRJ K 70 - 138 Jmol AstexViewer SPICE
2WRL K 70 - 138 Jmol AstexViewer SPICE
2X9S K 70 - 138 Jmol AstexViewer SPICE
2X9U K 70 - 138 Jmol AstexViewer SPICE
2XUX K 70 - 138 Jmol AstexViewer SPICE
3FIN L 70 - 138 Jmol AstexViewer SPICE
3I8I L 70 - 138 Jmol AstexViewer SPICE
70 - 78 3EGV B 70 - 78 Jmol AstexViewer SPICE
Ribosomal_L11_N 7 - 65 2WH2 K 7 - 65 Jmol AstexViewer SPICE
2WH4 K 7 - 65 Jmol AstexViewer SPICE
2WRJ K 7 - 65 Jmol AstexViewer SPICE
2WRL K 7 - 65 Jmol AstexViewer SPICE
2X9S K 7 - 65 Jmol AstexViewer SPICE
2X9U K 7 - 65 Jmol AstexViewer SPICE
2XUX K 7 - 65 Jmol AstexViewer SPICE
3EGV B 7 - 65 Jmol AstexViewer SPICE
3FIN L 7 - 65 Jmol AstexViewer SPICE
3I8I L 7 - 65 Jmol AstexViewer SPICE