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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q5TKP3_ORYSJ (Q5TKP3)

Summary

This is the summary of UniProt entry Q5TKP3_ORYSJ (Q5TKP3).

Description: Putative 60S ribosomal L28 protein
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 147 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L28e 8 130
disorder n/a 44 45
disorder n/a 54 55
disorder n/a 69 73
disorder n/a 81 87
disorder n/a 97 98
disorder n/a 106 107
disorder n/a 131 147

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5TKP3. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MATVPEPLIW EIVKKNNCFL VKQFGNSNAK VQFTKEPNNL YNVHSYKHSG
50
51
LANKKTVTIQ PSGVKDAAVV LSTTKTKKQN APAKLYHKSV MRKEFRKMAK
100
101
AVKNQVSDNY YRPDLTKPAL ARLSSVYRSL QVSKSGAKKK NRQPTKL   
147
 

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Checksums:
CRC64:3092AB54910D925B
MD5:964f27497ad6287994b339fef04f92ba

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L28e 57 - 129 3IZR b 58 - 130 Jmol AstexViewer SPICE