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5  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: FPG_MIMIV (Q5UQ00)

Summary

This is the summary of UniProt entry FPG_MIMIV (Q5UQ00).

Description: Probable formamidopyrimidine-DNA glycosylase EC=3.2.2.23 EC=4.2.99.18
Source organism: Acanthamoeba polyphaga mimivirus (APMV) (NCBI taxonomy ID 212035)
View Pfam proteome data.
Length: 287 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Fapy_DNA_glyco 2 120
Pfam A H2TH 135 218
low_complexity n/a 141 154
disorder n/a 233 238
disorder n/a 266 268

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q5UQ00. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MPEGPEVALT ADILEKYFKG KTLEYIDFIS GRYSKSEPEG YDDFIANLPL
50
51
KVSNVDTKGK FLWFELFDPN DKSNKWYIWN TFGLTGMWSL FEAKYTRAVL
100
101
SFDNELMAYF SDMRNFGTFK FSNSEKELKR KLNELGPDFL KNDDIDISKI
150
151
KKYKQPIVAL LMDQKKIGSG LGNYLVAEIL YRAKIDPHKL GSNLTDQEIE
200
201
NLWYWIKYET KLAYDSNHIG YMVNLENESS KIGRKNYHPN IHPTEKEFDF
250
251
LVYRKKKDPN GNKVIADKII GSGKNKRTTY WAPAIQK              
287
 

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Checksums:
CRC64:745EE3385D9581AB
MD5:932e92cb592ead07e34159e9ad8c97fd

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Fapy_DNA_glyco 2 - 120 3A42 A 2 - 120 Jmol AstexViewer SPICE
3A45 A 2 - 120 Jmol AstexViewer SPICE
B 2 - 120 Jmol AstexViewer SPICE
3A46 A 2 - 120 Jmol AstexViewer SPICE
B 2 - 120 Jmol AstexViewer SPICE
3VK7 A 2 - 120 Jmol AstexViewer SPICE
B 2 - 120 Jmol AstexViewer SPICE
3VK8 A 2 - 120 Jmol AstexViewer SPICE
B 2 - 120 Jmol AstexViewer SPICE
H2TH 135 - 218 3A42 A 135 - 218 Jmol AstexViewer SPICE
3A45 A 135 - 218 Jmol AstexViewer SPICE
B 135 - 218 Jmol AstexViewer SPICE
3A46 A 135 - 218 Jmol AstexViewer SPICE
B 135 - 218 Jmol AstexViewer SPICE
3VK7 A 135 - 218 Jmol AstexViewer SPICE
B 135 - 218 Jmol AstexViewer SPICE
3VK8 A 135 - 218 Jmol AstexViewer SPICE
B 135 - 218 Jmol AstexViewer SPICE