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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q6I608_ORYSJ (Q6I608)

Summary

This is the summary of UniProt entry Q6I608_ORYSJ (Q6I608).

Description: cDNA clone:J033107H21, full insert sequence
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 111 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
Pfam A Ribosomal_L35Ae 11 105
disorder n/a 83 90

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6I608. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MKGRQGQRVR LYVRGTILGY KRSKSNQYEN TSLLQIEGVN TKEEVGWYAG
50
51
KRIAYVYKAK TKSNDSTIRC IWGKVTRPHG NSGVVRAKFR SNLPPTSMGK
100
101
KVRVFMYPSS I                                          
111
 

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Checksums:
CRC64:C1506843F4E142D2
MD5:ec23612b4c5b455bb453b1e5475f33b0

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L35Ae 11 - 104 3IZR j 11 - 104 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.