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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q6K1W6_ORYSJ (Q6K1W6)

Summary

This is the summary of UniProt entry Q6K1W6_ORYSJ (Q6K1W6).

Description: cDNA clone:J023134I03, full insert sequence
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 171 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 22
Pfam A Ribosomal_L22 17 153
disorder n/a 69 83
disorder n/a 124 137
disorder n/a 152 154
low_complexity n/a 153 163
disorder n/a 158 171

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6K1W6. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MVKYSREANN PTKSSKAMGR DLRVHFKNTR ETAFAIRKLP LGKAKRYLED
50
51
VIAHKQAIPF RRYCGGVGRT AQAKSRHSNG QGRWPAKSAR FILDLLKNAE
100
101
SNAEVKGLDV DTLYVSHIQV NQAQKQRRRT YRAHGRINPY MSSPCHIELI
150
151
LSEKEEPVKK EPESQIAARK A                               
171
 

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Checksums:
CRC64:7AD3CA160803C1E9
MD5:38cce5392770027b173c1645bdeabb43

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribosomal_L22 17 - 153 3IZR V 17 - 153 Jmol AstexViewer SPICE

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.