Summary
This is the summary of UniProt entry Q6ZLB8_ORYSJ (Q6ZLB8).
| Description: | cDNA clone:006-310-C02, full insert sequence |
| Source organism: |
Oryza sativa subsp. japonica (Rice)
(NCBI taxonomy ID
39947)
View Pfam proteome data. |
| Length: | 405 amino acids |
Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.
Pfam domains
| Source | Domain | Start | End |
|---|---|---|---|
| disorder | n/a | 1 | 2 |
| disorder | n/a | 10 | 14 |
| Pfam A | Ribosomal_L4 | 26 | 268 |
| disorder | n/a | 58 | 65 |
| disorder | n/a | 67 | 94 |
| low_complexity | n/a | 126 | 143 |
| disorder | n/a | 192 | 194 |
| Pfam A | Ribos_L4_asso_C | 280 | 358 |
| disorder | n/a | 309 | 312 |
| low_complexity | n/a | 312 | 321 |
| disorder | n/a | 314 | 319 |
| low_complexity | n/a | 347 | 358 |
| disorder | n/a | 358 | 369 |
| low_complexity | n/a | 371 | 380 |
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Sequence annotations
This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...
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Sequence information
This is the amino acid sequence of the UniProt sequence database entry with the accession Q6ZLB8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.
| Sequence: | 1
MATQTRPLVS VKALEGDMAT DNSSSLALAE VFRAPLRPDV VRFVHRLLSC
50 51
NKRQPYAVSR RAGHQTSAES WGTGRAVSRI PRVPGGGTHR AGQGAFGNMC
100 101
RGGRMFAPTK TWRKWHRRVN VHLRRVAVAS ALAATSVPSL VLARGHRIET
150 151
VPELPLVISD SAESIEKTSQ AIKILKQVGA YADAEKAKDS VGIRPGKGKM
200 201
RNRRYINRKG PLIVYGTEGS KIVKAFRNLP GVDVANVERL NLLDLAPGGH
250 251
LGRFVIWTES AFKKLEEVYG TFEAPSLKKK GFILPRPKMA NADLGRIINS
300 301
DEVQSVVKPL NKEVKRREKR KNPLKNVAAV LKLNPYFGTA RKMATLAEAA
350 351
RIKARKEKLD SKRTKLSPEE AAKVKAAGKA WYKTMISDSD YAEFDNFSKW
400 401
LGVTQ
405
Show the unformatted sequence. |
| Checksums: |
CRC64:2C1C930183EE240D
MD5:38d532af98ef4e0f78a4906689702c91
|
Structures
For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.
| Pfam family | UniProt residues | PDB ID | PDB chain ID | PDB residues | View |
|---|---|---|---|---|---|
| Ribos_L4_asso_C | 303 - 358 | 3IZR | D | 303 - 358 | Jmol AstexViewer SPICE |
| Ribosomal_L4 | 26 - 268 | 3IZR | D | 26 - 268 | Jmol AstexViewer SPICE |