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1  structure 1  species 0  interactions 1  sequence 1  architecture

Protein: Q6ZLB8_ORYSJ (Q6ZLB8)

Summary

This is the summary of UniProt entry Q6ZLB8_ORYSJ (Q6ZLB8).

Description: cDNA clone:006-310-C02, full insert sequence
Source organism: Oryza sativa subsp. japonica (Rice) (NCBI taxonomy ID 39947)
View Pfam proteome data.
Length: 405 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 2
disorder n/a 10 14
Pfam A Ribosomal_L4 26 268
disorder n/a 58 65
disorder n/a 67 94
low_complexity n/a 126 143
disorder n/a 192 194
Pfam A Ribos_L4_asso_C 280 358
disorder n/a 309 312
low_complexity n/a 312 321
disorder n/a 314 319
low_complexity n/a 347 358
disorder n/a 358 369
low_complexity n/a 371 380

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Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

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Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6ZLB8. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MATQTRPLVS VKALEGDMAT DNSSSLALAE VFRAPLRPDV VRFVHRLLSC
50
51
NKRQPYAVSR RAGHQTSAES WGTGRAVSRI PRVPGGGTHR AGQGAFGNMC
100
101
RGGRMFAPTK TWRKWHRRVN VHLRRVAVAS ALAATSVPSL VLARGHRIET
150
151
VPELPLVISD SAESIEKTSQ AIKILKQVGA YADAEKAKDS VGIRPGKGKM
200
201
RNRRYINRKG PLIVYGTEGS KIVKAFRNLP GVDVANVERL NLLDLAPGGH
250
251
LGRFVIWTES AFKKLEEVYG TFEAPSLKKK GFILPRPKMA NADLGRIINS
300
301
DEVQSVVKPL NKEVKRREKR KNPLKNVAAV LKLNPYFGTA RKMATLAEAA
350
351
RIKARKEKLD SKRTKLSPEE AAKVKAAGKA WYKTMISDSD YAEFDNFSKW
400
401
LGVTQ                                                 
405
 

Show the unformatted sequence.

Checksums:
CRC64:2C1C930183EE240D
MD5:38d532af98ef4e0f78a4906689702c91

Structures

For those sequences which have a structure in the Protein DataBank, we use the mapping between UniProt, PDB and Pfam coordinate systems from the MSD group, to allow us to map Pfam domains onto UniProt three-dimensional structures. The table below shows the mapping between Pfam domains, this UniProt entry and a corresponding three dimensional structure.

Pfam family UniProt residues PDB ID PDB chain ID PDB residues View
Ribos_L4_asso_C 303 - 358 3IZR D 303 - 358 Jmol AstexViewer SPICE
Ribosomal_L4 26 - 268 3IZR D 26 - 268 Jmol AstexViewer SPICE